Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RNF41Q9H4P4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 AC084018.2-201ENST00000613093 2607 ntBASIC19.3■□□□□ 0.68
RNF41Q9H4P4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 AC109322.1-201ENST00000524499 1264 ntBASIC19.3■□□□□ 0.68
RNF41Q9H4P4 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RNF41Q9H4P4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.29■□□□□ 0.68
RNF41Q9H4P4 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 AC061975.2-201ENST00000581722 295 ntBASIC19.29■□□□□ 0.68
RNF41Q9H4P4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 MIR4321-201ENST00000592276 80 ntBASIC19.29■□□□□ 0.68
RNF41Q9H4P4 AC018529.1-201ENST00000613063 361 ntBASIC19.29■□□□□ 0.68
RNF41Q9H4P4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RNF41Q9H4P4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 AC069262.1-201ENST00000539058 672 ntBASIC19.28■□□□□ 0.68
RNF41Q9H4P4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 AC006449.6-201ENST00000612330 2296 ntBASIC19.28■□□□□ 0.68
RNF41Q9H4P4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.28■□□□□ 0.68
RNF41Q9H4P4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms