Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.35■■□□□ 1.01
ABCA3Q99758 AL096828.3-201ENST00000615354 462 ntBASIC21.35■■□□□ 1.01
ABCA3Q99758 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC21.35■■□□□ 1.01
ABCA3Q99758 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
ABCA3Q99758 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC21.35■■□□□ 1.01
ABCA3Q99758 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC21.35■■□□□ 1.01
ABCA3Q99758 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 AC005622.1-201ENST00000636801 1703 ntBASIC21.35■■□□□ 1.01
ABCA3Q99758 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 AL607033.1-201ENST00000623900 1599 ntBASIC21.35■■□□□ 1.01
ABCA3Q99758 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
ABCA3Q99758 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
ABCA3Q99758 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.35■■□□□ 1.01
ABCA3Q99758 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC21.35■■□□□ 1.01
ABCA3Q99758 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC21.35■■□□□ 1.01
ABCA3Q99758 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC21.35■■□□□ 1.01
ABCA3Q99758 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ABCA3Q99758 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC21.35■■□□□ 1.01
ABCA3Q99758 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
ABCA3Q99758 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC21.34■■□□□ 1.01
ABCA3Q99758 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC21.34■■□□□ 1.01
ABCA3Q99758 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.34■■□□□ 1.01
ABCA3Q99758 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.34■■□□□ 1.01
ABCA3Q99758 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC21.34■■□□□ 1.01
ABCA3Q99758 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
ABCA3Q99758 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.34■■□□□ 1.01
ABCA3Q99758 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.34■■□□□ 1.01
ABCA3Q99758 AC138028.6-201ENST00000616106 1482 ntBASIC21.34■■□□□ 1.01
ABCA3Q99758 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 RNU1-114P-201ENST00000365297 166 ntBASIC21.34■■□□□ 1.01
ABCA3Q99758 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC21.34■■□□□ 1.01
ABCA3Q99758 FOS-206ENST00000555347 1280 ntTSL 2 BASIC21.34■■□□□ 1.01
ABCA3Q99758 MIR4741-201ENST00000579822 90 ntBASIC21.34■■□□□ 1.01
ABCA3Q99758 NAT9-224ENST00000583757 583 ntTSL 3 BASIC21.34■■□□□ 1.01
ABCA3Q99758 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ABCA3Q99758 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
ABCA3Q99758 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
ABCA3Q99758 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 BNIP3P1-202ENST00000550043 1585 ntBASIC21.34■■□□□ 1.01
ABCA3Q99758 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.34■■□□□ 1.01
ABCA3Q99758 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ABCA3Q99758 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ABCA3Q99758 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.33■■□□□ 1.01
ABCA3Q99758 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ABCA3Q99758 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
ABCA3Q99758 RPS3-201ENST00000278572 907 ntTSL 3 BASIC21.33■■□□□ 1.01
ABCA3Q99758 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
ABCA3Q99758 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
ABCA3Q99758 HSPB1P2-201ENST00000448722 546 ntBASIC21.33■■□□□ 1.01
ABCA3Q99758 ARTN-209ENST00000479128 471 ntTSL 3 BASIC21.33■■□□□ 1.01
ABCA3Q99758 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC21.33■■□□□ 1.01
ABCA3Q99758 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
ABCA3Q99758 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.33■■□□□ 1
ABCA3Q99758 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
ABCA3Q99758 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
ABCA3Q99758 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.33■■□□□ 1
ABCA3Q99758 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
ABCA3Q99758 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC21.33■■□□□ 1
ABCA3Q99758 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.33■■□□□ 1
ABCA3Q99758 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.33■■□□□ 1
ABCA3Q99758 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
ABCA3Q99758 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC21.32■■□□□ 1
ABCA3Q99758 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC21.32■■□□□ 1
ABCA3Q99758 TSACC-208ENST00000481479 741 ntTSL 2 BASIC21.32■■□□□ 1
ABCA3Q99758 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC21.32■■□□□ 1
ABCA3Q99758 AC026410.3-201ENST00000514280 936 ntBASIC21.32■■□□□ 1
ABCA3Q99758 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ABCA3Q99758 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC21.32■■□□□ 1
ABCA3Q99758 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC21.32■■□□□ 1
ABCA3Q99758 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC21.32■■□□□ 1
ABCA3Q99758 EEF1DP1-201ENST00000585891 896 ntBASIC21.32■■□□□ 1
ABCA3Q99758 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC21.32■■□□□ 1
ABCA3Q99758 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ABCA3Q99758 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC21.32■■□□□ 1
ABCA3Q99758 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ABCA3Q99758 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ABCA3Q99758 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms