Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.37■□□□□ 0.37
RAD9AQ99638 ACTG1P3-201ENST00000431775 1114 ntBASIC17.37■□□□□ 0.37
RAD9AQ99638 AL162726.2-201ENST00000438986 1017 ntBASIC17.37■□□□□ 0.37
RAD9AQ99638 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.37■□□□□ 0.37
RAD9AQ99638 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.37■□□□□ 0.37
RAD9AQ99638 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC17.37■□□□□ 0.37
RAD9AQ99638 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.37■□□□□ 0.37
RAD9AQ99638 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.37■□□□□ 0.37
RAD9AQ99638 AC133539.2-201ENST00000604757 467 ntBASIC17.37■□□□□ 0.37
RAD9AQ99638 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 TUBB1P2-201ENST00000422712 1306 ntBASIC17.37■□□□□ 0.37
RAD9AQ99638 TUBB1P1-201ENST00000503144 1300 ntBASIC17.37■□□□□ 0.37
RAD9AQ99638 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RAD9AQ99638 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.37■□□□□ 0.37
RAD9AQ99638 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.37■□□□□ 0.37
RAD9AQ99638 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RAD9AQ99638 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAD9AQ99638 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 CROCCP2-202ENST00000412962 2773 ntBASIC17.36■□□□□ 0.37
RAD9AQ99638 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RAD9AQ99638 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RAD9AQ99638 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 AC092933.1-201ENST00000393644 945 ntBASIC17.36■□□□□ 0.37
RAD9AQ99638 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 BRWD1P1-201ENST00000401091 371 ntBASIC17.36■□□□□ 0.37
RAD9AQ99638 AL442647.2-201ENST00000429864 857 ntBASIC17.36■□□□□ 0.37
RAD9AQ99638 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.36■□□□□ 0.37
RAD9AQ99638 AL355994.2-201ENST00000447882 704 ntBASIC17.36■□□□□ 0.37
RAD9AQ99638 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.36■□□□□ 0.37
RAD9AQ99638 RNA5SP412-201ENST00000516234 123 ntBASIC17.36■□□□□ 0.37
RAD9AQ99638 CD74-212ENST00000524315 584 ntTSL 5 BASIC17.36■□□□□ 0.37
RAD9AQ99638 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC17.36■□□□□ 0.37
RAD9AQ99638 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.36■□□□□ 0.37
RAD9AQ99638 AL022328.1-201ENST00000610050 478 ntBASIC17.36■□□□□ 0.37
RAD9AQ99638 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.36■□□□□ 0.37
RAD9AQ99638 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RAD9AQ99638 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.36■□□□□ 0.37
RAD9AQ99638 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAD9AQ99638 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RAD9AQ99638 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.35■□□□□ 0.37
RAD9AQ99638 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.35■□□□□ 0.37
RAD9AQ99638 AC036164.1-201ENST00000570544 333 ntBASIC17.35■□□□□ 0.37
RAD9AQ99638 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAD9AQ99638 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 AC020907.1-201ENST00000616460 1350 ntBASIC17.35■□□□□ 0.37
RAD9AQ99638 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.35■□□□□ 0.37
RAD9AQ99638 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RAD9AQ99638 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAD9AQ99638 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
RAD9AQ99638 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 AC134043.2-201ENST00000624206 2238 ntBASIC17.35■□□□□ 0.37
RAD9AQ99638 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.35■□□□□ 0.37
RAD9AQ99638 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAD9AQ99638 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.35■□□□□ 0.37
RAD9AQ99638 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms