Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 MTND6P24-201ENST00000440466 518 ntBASIC15.89■□□□□ 0.13
SLC38A3Q99624 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 AC138761.1-201ENST00000584393 385 ntBASIC15.89■□□□□ 0.13
SLC38A3Q99624 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.89■□□□□ 0.13
SLC38A3Q99624 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SLC38A3Q99624 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC38A3Q99624 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC38A3Q99624 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC38A3Q99624 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC38A3Q99624 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC38A3Q99624 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC38A3Q99624 AC093724.1-201ENST00000448659 1027 ntBASIC15.88■□□□□ 0.13
SLC38A3Q99624 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.88■□□□□ 0.13
SLC38A3Q99624 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.88■□□□□ 0.13
SLC38A3Q99624 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 AC105020.1-201ENST00000435356 2205 ntBASIC15.88■□□□□ 0.13
SLC38A3Q99624 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
SLC38A3Q99624 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SLC38A3Q99624 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SLC38A3Q99624 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 AC008894.3-201ENST00000624324 3103 ntBASIC15.87■□□□□ 0.13
SLC38A3Q99624 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 AC024267.1-201ENST00000582320 895 ntBASIC15.87■□□□□ 0.13
SLC38A3Q99624 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 SPDYE12P-201ENST00000618416 771 ntBASIC15.87■□□□□ 0.13
SLC38A3Q99624 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.87■□□□□ 0.13
SLC38A3Q99624 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SLC38A3Q99624 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms