Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 HLA-V-204ENST00000476601 1289 ntBASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 AC073592.8-201ENST00000624126 511 ntBASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 AC080080.1-201ENST00000625121 2420 ntBASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDK5RAP1Q96SZ6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 IGHV3-42-201ENST00000520410 361 ntBASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 AC105021.1-202ENST00000570572 669 ntBASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 MIR4321-201ENST00000592276 80 ntBASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.97■□□□□ 0.31
CDK5RAP1Q96SZ6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 AC008894.3-201ENST00000624324 3103 ntBASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 TREML5P-201ENST00000421694 576 ntBASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 AC245100.5-201ENST00000452108 331 ntBASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 AC093214.1-201ENST00000511688 1107 ntBASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 AC005498.2-205ENST00000593218 784 ntBASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 RN7SL828P-201ENST00000607615 303 ntBASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 FO538757.1-201ENST00000623083 1397 ntBASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDK5RAP1Q96SZ6 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms