Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 AL136379.1-201ENST00000623471 2642 ntBASIC13.37□□□□□ -0.27
RAB40CQ96S21 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 MPDU1-223ENST00000582151 728 ntBASIC13.37□□□□□ -0.27
RAB40CQ96S21 NDUFV2-AS1-203ENST00000608008 779 ntBASIC13.37□□□□□ -0.27
RAB40CQ96S21 AC010654.1-201ENST00000615722 808 ntBASIC13.37□□□□□ -0.27
RAB40CQ96S21 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 TNRC18P2-201ENST00000417666 2714 ntBASIC13.37□□□□□ -0.27
RAB40CQ96S21 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 OR2I1P-210ENST00000642037 4691 ntBASIC13.37□□□□□ -0.27
RAB40CQ96S21 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.37□□□□□ -0.27
RAB40CQ96S21 INTS4P1-201ENST00000438455 1935 ntBASIC13.37□□□□□ -0.27
RAB40CQ96S21 AL590787.1-201ENST00000568856 1315 ntBASIC13.37□□□□□ -0.27
RAB40CQ96S21 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RAB40CQ96S21 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 KRT8P26-201ENST00000534154 1276 ntBASIC13.36□□□□□ -0.27
RAB40CQ96S21 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 AC011498.5-201ENST00000592027 486 ntBASIC13.36□□□□□ -0.27
RAB40CQ96S21 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 AP000867.4-201ENST00000641616 219 ntBASIC13.36□□□□□ -0.27
RAB40CQ96S21 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
RAB40CQ96S21 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAB40CQ96S21 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.35□□□□□ -0.27
RAB40CQ96S21 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAB40CQ96S21 AC007326.2-201ENST00000624224 7579 ntBASIC13.35□□□□□ -0.27
RAB40CQ96S21 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms