Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC15.52■□□□□ 0.08
NR1H4Q96RI1 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC15.52■□□□□ 0.08
NR1H4Q96RI1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H4Q96RI1 SLC25A1P2-201ENST00000430693 912 ntBASIC15.52■□□□□ 0.08
NR1H4Q96RI1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.52■□□□□ 0.08
NR1H4Q96RI1 CCR12P-201ENST00000446203 998 ntBASIC15.52■□□□□ 0.08
NR1H4Q96RI1 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.52■□□□□ 0.08
NR1H4Q96RI1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.52■□□□□ 0.08
NR1H4Q96RI1 AL353719.1-201ENST00000566847 864 ntBASIC15.52■□□□□ 0.08
NR1H4Q96RI1 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NR1H4Q96RI1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.52■□□□□ 0.08
NR1H4Q96RI1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.52■□□□□ 0.08
NR1H4Q96RI1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H4Q96RI1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NR1H4Q96RI1 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 AC087481.3-201ENST00000602886 1894 ntBASIC15.52■□□□□ 0.07
NR1H4Q96RI1 REXO1L8P-201ENST00000604378 1897 ntBASIC15.52■□□□□ 0.07
NR1H4Q96RI1 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NR1H4Q96RI1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 AC015656.1-201ENST00000624209 3578 ntBASIC15.51■□□□□ 0.07
NR1H4Q96RI1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 OR2I1P-210ENST00000642037 4691 ntBASIC15.51■□□□□ 0.07
NR1H4Q96RI1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 AC092919.2-201ENST00000623631 1645 ntBASIC15.51■□□□□ 0.07
NR1H4Q96RI1 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 AL023803.3-201ENST00000615559 522 ntBASIC15.51■□□□□ 0.07
NR1H4Q96RI1 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.51■□□□□ 0.07
NR1H4Q96RI1 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.51■□□□□ 0.07
NR1H4Q96RI1 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 MIR648-201ENST00000385046 94 ntBASIC15.5■□□□□ 0.07
NR1H4Q96RI1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 BX088651.1-201ENST00000540551 451 ntBASIC15.5■□□□□ 0.07
NR1H4Q96RI1 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NR1H4Q96RI1 AC116562.4-202ENST00000641738 218 ntBASIC15.5■□□□□ 0.07
NR1H4Q96RI1 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms