Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SMARCD1Q96GM5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMARCD1Q96GM5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMARCD1Q96GM5 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SMARCD1Q96GM5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 AC069120.2-201ENST00000524091 540 ntBASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 DUX4L27-201ENST00000554796 1261 ntBASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 PCDHA14-201ENST00000506751 2298 ntBASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SMARCD1Q96GM5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 MIR943-201ENST00000401286 94 ntBASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 MIR4321-201ENST00000592276 80 ntBASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCD1Q96GM5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 REXO1L8P-201ENST00000604378 1897 ntBASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCD1Q96GM5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms