Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 ENPP7P5-201ENST00000541031 1031 ntBASIC19.86■□□□□ 0.77
CNKSR1Q969H4 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 PTP4A1P2-201ENST00000546033 454 ntBASIC19.86■□□□□ 0.77
CNKSR1Q969H4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 AL359711.2-201ENST00000563105 872 ntBASIC19.86■□□□□ 0.77
CNKSR1Q969H4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 BRI3BPP1-201ENST00000594224 787 ntBASIC19.86■□□□□ 0.77
CNKSR1Q969H4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.86■□□□□ 0.77
CNKSR1Q969H4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 AC067852.2-201ENST00000590513 2313 ntBASIC19.85■□□□□ 0.77
CNKSR1Q969H4 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 AC108725.1-201ENST00000495472 409 ntBASIC19.85■□□□□ 0.77
CNKSR1Q969H4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 AL390961.4-201ENST00000623958 2535 ntBASIC19.85■□□□□ 0.77
CNKSR1Q969H4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CNKSR1Q969H4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 RPL13P2-201ENST00000440687 659 ntBASIC19.84■□□□□ 0.77
CNKSR1Q969H4 PFN1P12-201ENST00000455938 534 ntBASIC19.84■□□□□ 0.77
CNKSR1Q969H4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 FAM86LP-201ENST00000478302 853 ntBASIC19.84■□□□□ 0.77
CNKSR1Q969H4 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 AP000812.2-201ENST00000538934 718 ntBASIC19.84■□□□□ 0.77
CNKSR1Q969H4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CNKSR1Q969H4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms