Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.52□□□□□ -0.09
AP3S1Q92572 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
AP3S1Q92572 TCAF2P1-201ENST00000291129 2421 ntBASIC14.52□□□□□ -0.09
AP3S1Q92572 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
AP3S1Q92572 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.52□□□□□ -0.09
AP3S1Q92572 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
AP3S1Q92572 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 AC092919.2-201ENST00000623631 1645 ntBASIC14.52□□□□□ -0.09
AP3S1Q92572 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.52□□□□□ -0.09
AP3S1Q92572 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S1Q92572 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.51□□□□□ -0.09
AP3S1Q92572 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.51□□□□□ -0.09
AP3S1Q92572 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.51□□□□□ -0.09
AP3S1Q92572 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.51□□□□□ -0.09
AP3S1Q92572 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.51□□□□□ -0.09
AP3S1Q92572 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
AP3S1Q92572 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.51□□□□□ -0.09
AP3S1Q92572 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.51□□□□□ -0.09
AP3S1Q92572 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
AP3S1Q92572 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC14.51□□□□□ -0.09
AP3S1Q92572 FAM87A-204ENST00000613235 858 ntBASIC14.51□□□□□ -0.09
AP3S1Q92572 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.51□□□□□ -0.09
AP3S1Q92572 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.51□□□□□ -0.09
AP3S1Q92572 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.51□□□□□ -0.09
AP3S1Q92572 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
AP3S1Q92572 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
AP3S1Q92572 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
AP3S1Q92572 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.51□□□□□ -0.09
AP3S1Q92572 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
AP3S1Q92572 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.51□□□□□ -0.09
AP3S1Q92572 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.51□□□□□ -0.09
AP3S1Q92572 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.51□□□□□ -0.09
AP3S1Q92572 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S1Q92572 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.5□□□□□ -0.09
AP3S1Q92572 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 KRT8P39-201ENST00000396270 1433 ntBASIC14.5□□□□□ -0.09
AP3S1Q92572 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 AC026748.1-201ENST00000624349 3251 ntBASIC14.5□□□□□ -0.09
AP3S1Q92572 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
AP3S1Q92572 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.5□□□□□ -0.09
AP3S1Q92572 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
AP3S1Q92572 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.5□□□□□ -0.09
AP3S1Q92572 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.5□□□□□ -0.09
AP3S1Q92572 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.5□□□□□ -0.09
AP3S1Q92572 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 HLA-L-209ENST00000420110 1011 ntBASIC14.5□□□□□ -0.09
AP3S1Q92572 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
AP3S1Q92572 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.5□□□□□ -0.09
AP3S1Q92572 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.5□□□□□ -0.09
AP3S1Q92572 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC14.5□□□□□ -0.09
AP3S1Q92572 MIR4785-201ENST00000585005 73 ntBASIC14.5□□□□□ -0.09
AP3S1Q92572 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
AP3S1Q92572 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.5□□□□□ -0.09
AP3S1Q92572 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.5□□□□□ -0.09
AP3S1Q92572 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S1Q92572 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms