Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ALMS1Q8TCU4 NDUFV2P1-201ENST00000596415 907 ntBASIC10.83□□□□□ -0.68
ALMS1Q8TCU4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ALMS1Q8TCU4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
ALMS1Q8TCU4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
ALMS1Q8TCU4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
ALMS1Q8TCU4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AHCYP2-201ENST00000430630 1300 ntBASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AL590640.2-201ENST00000457038 527 ntBASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AP001505.2-201ENST00000616815 443 ntBASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AC091812.3-201ENST00000621362 345 ntBASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AC069218.1-201ENST00000435269 762 ntBASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AL645939.5-201ENST00000606834 243 ntBASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 MIR7845-201ENST00000618396 99 ntBASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AL451050.2-201ENST00000606967 682 ntBASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 AC008764.6-201ENST00000595909 2069 ntBASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
ALMS1Q8TCU4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 TOMM22P5-201ENST00000416399 439 ntBASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 AC134915.1-201ENST00000426461 574 ntBASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 FNTAP2-201ENST00000430308 634 ntBASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 POM121L10P-201ENST00000436994 1285 ntBASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 EEF1DP1-201ENST00000585891 896 ntBASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
ALMS1Q8TCU4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms