Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.81□□□□□ -0.04
FNDC9Q8TBE3 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 AL512652.2-201ENST00000625156 1716 ntBASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 KRT8P23-201ENST00000560090 1207 ntBASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 AC004449.1-201ENST00000564240 433 ntBASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 AC008267.7-201ENST00000624570 1194 ntBASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 AC106886.4-201ENST00000623557 2502 ntBASIC14.8□□□□□ -0.04
FNDC9Q8TBE3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 FAM58DP-201ENST00000428076 619 ntBASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 AL138918.1-201ENST00000568306 659 ntBASIC14.79□□□□□ -0.04
FNDC9Q8TBE3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms