Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 AL009183.1-201ENST00000603760 355 ntBASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCC2Q8TAQ2 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
SMARCC2Q8TAQ2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 AC005622.1-201ENST00000636801 1703 ntBASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 AC254562.1-201ENST00000417586 456 ntBASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 AC109635.5-201ENST00000533593 962 ntBASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 AC099522.2-201ENST00000607001 744 ntBASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCC2Q8TAQ2 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 AC046158.3-201ENST00000624947 2558 ntBASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCC2Q8TAQ2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
SMARCC2Q8TAQ2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms