Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 FAM86C2P-203ENST00000528684 1004 ntBASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 MIR4492-201ENST00000581627 80 ntBASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC33Q8N5R6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 AL512652.2-201ENST00000625156 1716 ntBASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 AL035633.1-201ENST00000406139 838 ntBASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 TFAMP1-201ENST00000412727 736 ntBASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 AC079140.1-201ENST00000508039 487 ntBASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 AP002490.2-201ENST00000524791 560 ntBASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 AC009093.7-201ENST00000623853 1223 ntBASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 Z92544.3-201ENST00000624747 417 ntBASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 DOC2GP-204ENST00000639052 2548 ntBASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC33Q8N5R6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC33Q8N5R6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms