Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ATPAF2Q8N5M1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATPAF2Q8N5M1 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ATPAF2Q8N5M1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 TFAMP1-201ENST00000412727 736 ntBASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 AC093724.1-201ENST00000448659 1027 ntBASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 REXO1L8P-201ENST00000604378 1897 ntBASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 AC006449.6-201ENST00000612330 2296 ntBASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 U82695.1-201ENST00000635752 1889 ntBASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ATPAF2Q8N5M1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 ADH5P3-201ENST00000433842 1137 ntBASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
ATPAF2Q8N5M1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ATPAF2Q8N5M1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.81■□□□□ 0.28
ATPAF2Q8N5M1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF2Q8N5M1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.81■□□□□ 0.28
ATPAF2Q8N5M1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF2Q8N5M1 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF2Q8N5M1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATPAF2Q8N5M1 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATPAF2Q8N5M1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms