Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.79■□□□□ 0.28
SIX5Q8N196 AC007389.4-201ENST00000454674 793 ntBASIC16.79■□□□□ 0.28
SIX5Q8N196 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
SIX5Q8N196 AC023310.3-201ENST00000557027 670 ntBASIC16.79■□□□□ 0.28
SIX5Q8N196 AC100756.1-201ENST00000562736 682 ntBASIC16.79■□□□□ 0.28
SIX5Q8N196 AC138749.3-201ENST00000567691 622 ntBASIC16.79■□□□□ 0.28
SIX5Q8N196 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SIX5Q8N196 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.79■□□□□ 0.28
SIX5Q8N196 AC116165.1-201ENST00000611806 668 ntBASIC16.79■□□□□ 0.28
SIX5Q8N196 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.79■□□□□ 0.28
SIX5Q8N196 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.79■□□□□ 0.28
SIX5Q8N196 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.79■□□□□ 0.28
SIX5Q8N196 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.79■□□□□ 0.28
SIX5Q8N196 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SIX5Q8N196 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.79■□□□□ 0.28
SIX5Q8N196 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.79■□□□□ 0.28
SIX5Q8N196 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SIX5Q8N196 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.79■□□□□ 0.28
SIX5Q8N196 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.79■□□□□ 0.28
SIX5Q8N196 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SIX5Q8N196 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.78■□□□□ 0.28
SIX5Q8N196 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 AC141586.5-201ENST00000624546 2050 ntBASIC16.78■□□□□ 0.28
SIX5Q8N196 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SIX5Q8N196 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.78■□□□□ 0.28
SIX5Q8N196 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SIX5Q8N196 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SIX5Q8N196 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.78■□□□□ 0.28
SIX5Q8N196 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SIX5Q8N196 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.78■□□□□ 0.28
SIX5Q8N196 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.78■□□□□ 0.28
SIX5Q8N196 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.78■□□□□ 0.28
SIX5Q8N196 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SIX5Q8N196 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.78■□□□□ 0.28
SIX5Q8N196 AC004461.2-201ENST00000629517 803 ntBASIC16.78■□□□□ 0.28
SIX5Q8N196 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.78■□□□□ 0.28
SIX5Q8N196 AC093525.9-201ENST00000624961 1746 ntBASIC16.78■□□□□ 0.28
SIX5Q8N196 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.78■□□□□ 0.28
SIX5Q8N196 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIX5Q8N196 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIX5Q8N196 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.77■□□□□ 0.28
SIX5Q8N196 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.77■□□□□ 0.28
SIX5Q8N196 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SIX5Q8N196 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIX5Q8N196 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIX5Q8N196 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.77■□□□□ 0.28
SIX5Q8N196 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
SIX5Q8N196 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.77■□□□□ 0.28
SIX5Q8N196 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIX5Q8N196 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.77■□□□□ 0.28
SIX5Q8N196 PKD1P5-201ENST00000532415 10291 ntBASIC16.77■□□□□ 0.28
SIX5Q8N196 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SIX5Q8N196 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
SIX5Q8N196 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.77■□□□□ 0.28
SIX5Q8N196 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.77■□□□□ 0.28
SIX5Q8N196 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.77■□□□□ 0.28
SIX5Q8N196 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.77■□□□□ 0.28
SIX5Q8N196 BNIP3P42-201ENST00000454982 569 ntBASIC16.77■□□□□ 0.28
SIX5Q8N196 CROCCP4-201ENST00000457096 498 ntBASIC16.77■□□□□ 0.28
SIX5Q8N196 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.77■□□□□ 0.28
SIX5Q8N196 BNIP3P29-201ENST00000598302 571 ntBASIC16.77■□□□□ 0.28
SIX5Q8N196 AC011447.5-201ENST00000616168 564 ntBASIC16.77■□□□□ 0.28
SIX5Q8N196 GPR182-203ENST00000622922 591 ntBASIC16.77■□□□□ 0.28
SIX5Q8N196 AL109936.8-201ENST00000641772 604 ntBASIC16.77■□□□□ 0.28
SIX5Q8N196 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SIX5Q8N196 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIX5Q8N196 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIX5Q8N196 AL390961.4-201ENST00000623958 2535 ntBASIC16.77■□□□□ 0.28
SIX5Q8N196 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.77■□□□□ 0.28
SIX5Q8N196 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
SIX5Q8N196 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIX5Q8N196 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SIX5Q8N196 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SIX5Q8N196 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms