Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 TIMM17BP1-201ENST00000545713 516 ntBASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 PTP4A1P2-201ENST00000546033 454 ntBASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 AC243562.2-201ENST00000561247 970 ntBASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 MIR6869-201ENST00000619434 62 ntBASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 GPR182-203ENST00000622922 591 ntBASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
COL27A1Q8IZC6 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 UBALD1-205ENST00000590891 2641 ntBASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 KLF2P4-201ENST00000451959 1225 ntBASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 POU5F1P6-201ENST00000466990 990 ntBASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 BTNL10-201ENST00000595971 695 ntBASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 AC000095.1-201ENST00000603208 874 ntBASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 AC107373.2-201ENST00000607735 490 ntBASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.15■□□□□ 0.02
COL27A1Q8IZC6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 KRT43P-201ENST00000434019 910 ntBASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 FO681548.1-201ENST00000455617 1132 ntBASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.14■□□□□ 0.01
COL27A1Q8IZC6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.13■□□□□ 0.01
COL27A1Q8IZC6 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms