Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.62■□□□□ 0.73
SLX4Q8IY92 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLX4Q8IY92 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLX4Q8IY92 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLX4Q8IY92 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLX4Q8IY92 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLX4Q8IY92 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLX4Q8IY92 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLX4Q8IY92 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLX4Q8IY92 MIR326-201ENST00000362220 95 ntBASIC19.61■□□□□ 0.73
SLX4Q8IY92 AC004987.2-201ENST00000395959 1148 ntBASIC19.61■□□□□ 0.73
SLX4Q8IY92 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLX4Q8IY92 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.61■□□□□ 0.73
SLX4Q8IY92 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.61■□□□□ 0.73
SLX4Q8IY92 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.61■□□□□ 0.73
SLX4Q8IY92 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC19.61■□□□□ 0.73
SLX4Q8IY92 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.61■□□□□ 0.73
SLX4Q8IY92 AL021578.1-201ENST00000613646 709 ntBASIC19.61■□□□□ 0.73
SLX4Q8IY92 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
SLX4Q8IY92 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLX4Q8IY92 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLX4Q8IY92 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.61■□□□□ 0.73
SLX4Q8IY92 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLX4Q8IY92 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLX4Q8IY92 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.61■□□□□ 0.73
SLX4Q8IY92 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLX4Q8IY92 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 AC007969.1-201ENST00000433675 447 ntBASIC19.6■□□□□ 0.73
SLX4Q8IY92 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.6■□□□□ 0.73
SLX4Q8IY92 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 CNN2P8-201ENST00000421872 913 ntBASIC19.6■□□□□ 0.73
SLX4Q8IY92 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.6■□□□□ 0.73
SLX4Q8IY92 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLX4Q8IY92 ENPP7P5-201ENST00000541031 1031 ntBASIC19.6■□□□□ 0.73
SLX4Q8IY92 AC134312.5-201ENST00000568031 1313 ntBASIC19.6■□□□□ 0.73
SLX4Q8IY92 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLX4Q8IY92 AC141586.5-201ENST00000624546 2050 ntBASIC19.59■□□□□ 0.73
SLX4Q8IY92 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLX4Q8IY92 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLX4Q8IY92 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLX4Q8IY92 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLX4Q8IY92 C1QBPP1-201ENST00000400117 770 ntBASIC19.59■□□□□ 0.73
SLX4Q8IY92 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLX4Q8IY92 OLR1-203ENST00000432556 950 ntTSL 2 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 RNA5SP423-201ENST00000517127 109 ntBASIC19.59■□□□□ 0.73
SLX4Q8IY92 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.59■□□□□ 0.73
SLX4Q8IY92 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLX4Q8IY92 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.58■□□□□ 0.73
SLX4Q8IY92 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SLX4Q8IY92 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SLX4Q8IY92 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SLX4Q8IY92 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLX4Q8IY92 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLX4Q8IY92 AC007613.1-201ENST00000572811 2597 ntBASIC19.58■□□□□ 0.73
SLX4Q8IY92 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SLX4Q8IY92 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms