Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 IGHV3-62-201ENST00000520057 340 ntBASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 UXT-AS1-201ENST00000590504 1525 ntBASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SCUBE3Q8IX30 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 KRT18P28-201ENST00000453838 1332 ntBASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AC254562.1-201ENST00000417586 456 ntBASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AC005237.2-201ENST00000434368 219 ntBASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AC244107.1-201ENST00000442033 332 ntBASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AP006288.1-201ENST00000446065 395 ntBASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AP000344.2-201ENST00000512987 629 ntBASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AC093520.2-201ENST00000561830 333 ntBASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 FOXO1B-201ENST00000504678 1527 ntBASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCUBE3Q8IX30 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 AC105233.2-201ENST00000523697 349 ntBASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 AF228730.5-201ENST00000530288 346 ntBASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 SNHG9-202ENST00000564014 471 ntBASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 AP000842.3-202ENST00000569238 1080 ntBASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.24■□□□□ 0.35
SCUBE3Q8IX30 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms