Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 AL139400.1-201ENST00000366220 510 ntBASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 AL139011.1-202ENST00000642063 584 ntBASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 AL645728.1-201ENST00000366221 2101 ntBASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRIM48Q8IWZ4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.14■□□□□ 0.18
TRIM48Q8IWZ4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRIM48Q8IWZ4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRIM48Q8IWZ4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.14■□□□□ 0.18
TRIM48Q8IWZ4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 AC005915.1-201ENST00000624912 2018 ntBASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 RBPMS2P1-201ENST00000437762 623 ntBASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 FAM86GP-201ENST00000448322 971 ntBASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 HLA-J-203ENST00000494367 1087 ntBASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM48Q8IWZ4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM48Q8IWZ4 PRYP6-201ENST00000514804 343 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms