Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
UBR1Q8IWV7 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC22.83■■□□□ 1.25
UBR1Q8IWV7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
UBR1Q8IWV7 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
UBR1Q8IWV7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC22.83■■□□□ 1.25
UBR1Q8IWV7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
UBR1Q8IWV7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
UBR1Q8IWV7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
UBR1Q8IWV7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
UBR1Q8IWV7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
UBR1Q8IWV7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.24
UBR1Q8IWV7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC22.83■■□□□ 1.24
UBR1Q8IWV7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC22.83■■□□□ 1.24
UBR1Q8IWV7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
UBR1Q8IWV7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 AC136604.1-201ENST00000418535 575 ntBASIC22.82■■□□□ 1.24
UBR1Q8IWV7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 CHMP4BP1-201ENST00000556017 588 ntBASIC22.82■■□□□ 1.24
UBR1Q8IWV7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 IFT20-208ENST00000578985 831 ntTSL 3 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 BNIP3P1-202ENST00000550043 1585 ntBASIC22.82■■□□□ 1.24
UBR1Q8IWV7 AL607033.1-201ENST00000623900 1599 ntBASIC22.82■■□□□ 1.24
UBR1Q8IWV7 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
UBR1Q8IWV7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 AC078819.1-201ENST00000547454 765 ntBASIC22.81■■□□□ 1.24
UBR1Q8IWV7 AC012085.1-201ENST00000548270 765 ntBASIC22.81■■□□□ 1.24
UBR1Q8IWV7 AP006547.1-201ENST00000563435 692 ntBASIC22.81■■□□□ 1.24
UBR1Q8IWV7 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 AL121723.1-201ENST00000445194 1519 ntBASIC22.81■■□□□ 1.24
UBR1Q8IWV7 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 PP12613-201ENST00000424958 2230 ntBASIC22.81■■□□□ 1.24
UBR1Q8IWV7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
UBR1Q8IWV7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 HIST2H2BC-201ENST00000498492 580 ntBASIC22.8■■□□□ 1.24
UBR1Q8IWV7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 AC016629.1-201ENST00000596579 586 ntBASIC22.8■■□□□ 1.24
UBR1Q8IWV7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 AC138951.2-201ENST00000623455 1161 ntBASIC22.8■■□□□ 1.24
UBR1Q8IWV7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
UBR1Q8IWV7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC22.79■■□□□ 1.24
UBR1Q8IWV7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
UBR1Q8IWV7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC22.79■■□□□ 1.24
UBR1Q8IWV7 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC22.79■■□□□ 1.24
UBR1Q8IWV7 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC22.79■■□□□ 1.24
UBR1Q8IWV7 AC026410.3-201ENST00000514280 936 ntBASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms