Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC60Q8IWA6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC60Q8IWA6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC60Q8IWA6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC60Q8IWA6 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 AC002472.2-201ENST00000442739 958 ntBASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC60Q8IWA6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 AC138761.1-201ENST00000584393 385 ntBASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 AL844908.2-201ENST00000609461 460 ntBASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 ME2P1-201ENST00000426028 1970 ntBASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC60Q8IWA6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC60Q8IWA6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC60Q8IWA6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.14■□□□□ 0.5
CCDC60Q8IWA6 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CCDC60Q8IWA6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.14■□□□□ 0.5
CCDC60Q8IWA6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.14■□□□□ 0.5
CCDC60Q8IWA6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC60Q8IWA6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 AC022144.1-201ENST00000602255 1580 ntBASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 AL035633.1-201ENST00000406139 838 ntBASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 AC009477.1-201ENST00000452936 217 ntBASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 MIR4321-201ENST00000592276 80 ntBASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC60Q8IWA6 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CCDC60Q8IWA6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CCDC60Q8IWA6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC60Q8IWA6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC60Q8IWA6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC60Q8IWA6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms