Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDKL3Q8IVW4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CDKL3Q8IVW4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 AC104109.2-201ENST00000602919 1418 ntBASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 KRT18P34-201ENST00000488218 1270 ntBASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 AC145285.3-201ENST00000564603 959 ntBASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 AC064836.3-201ENST00000607928 673 ntBASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 BCAR1-209ENST00000546196 1340 ntBASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDKL3Q8IVW4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDKL3Q8IVW4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms