Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 GPAA1P2-201ENST00000417923 928 ntBASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 NEU3-202ENST00000526068 431 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 AL158212.4-201ENST00000624062 1286 ntBASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 TIMM17BP1-201ENST00000545713 516 ntBASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 CLUHP6-201ENST00000580789 941 ntBASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 AC120498.9-201ENST00000339021 3867 ntBASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
VPS13BQ7Z7G8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 AC244669.2-201ENST00000612320 853 ntBASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 AC004461.2-201ENST00000629517 803 ntBASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 AC138627.1-207ENST00000641560 1006 ntBASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 AC105020.1-201ENST00000435356 2205 ntBASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
VPS13BQ7Z7G8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms