Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 AC092474.2-201ENST00000424288 719 ntBASIC18.72■□□□□ 0.59
ATL3Q6DD88 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 RHOQP3-201ENST00000437982 621 ntBASIC18.72■□□□□ 0.59
ATL3Q6DD88 KRT18P34-201ENST00000488218 1270 ntBASIC18.72■□□□□ 0.59
ATL3Q6DD88 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 AC096734.2-201ENST00000562054 433 ntBASIC18.72■□□□□ 0.59
ATL3Q6DD88 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 AL009183.1-201ENST00000603760 355 ntBASIC18.72■□□□□ 0.59
ATL3Q6DD88 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL3Q6DD88 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL3Q6DD88 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ATL3Q6DD88 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL3Q6DD88 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL3Q6DD88 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL3Q6DD88 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATL3Q6DD88 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 AC011477.6-201ENST00000604980 1927 ntBASIC18.71■□□□□ 0.59
ATL3Q6DD88 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 IGLL3P-201ENST00000412472 434 ntBASIC18.71■□□□□ 0.59
ATL3Q6DD88 HCG4B-203ENST00000450128 991 ntBASIC18.71■□□□□ 0.59
ATL3Q6DD88 AC092910.1-201ENST00000482027 1129 ntBASIC18.71■□□□□ 0.59
ATL3Q6DD88 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 AL773604.1-201ENST00000617417 272 ntBASIC18.71■□□□□ 0.59
ATL3Q6DD88 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ATL3Q6DD88 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL3Q6DD88 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL3Q6DD88 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATL3Q6DD88 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATL3Q6DD88 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL3Q6DD88 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL3Q6DD88 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 CRYGEP-201ENST00000412192 528 ntBASIC18.7■□□□□ 0.58
ATL3Q6DD88 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATL3Q6DD88 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL3Q6DD88 FAAHP1-202ENST00000446499 1238 ntBASIC18.7■□□□□ 0.58
ATL3Q6DD88 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL3Q6DD88 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL3Q6DD88 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL3Q6DD88 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL3Q6DD88 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
ATL3Q6DD88 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATL3Q6DD88 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATL3Q6DD88 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ATL3Q6DD88 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
ATL3Q6DD88 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ATL3Q6DD88 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATL3Q6DD88 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.69■□□□□ 0.58
ATL3Q6DD88 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATL3Q6DD88 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATL3Q6DD88 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms