Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 KRT18P2-201ENST00000447938 1258 ntBASIC17.02■□□□□ 0.32
LRRC38Q5VT99 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 AC002347.1-201ENST00000569543 541 ntBASIC17.02■□□□□ 0.32
LRRC38Q5VT99 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 AL161645.1-201ENST00000622716 1255 ntBASIC17.02■□□□□ 0.32
LRRC38Q5VT99 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.02■□□□□ 0.32
LRRC38Q5VT99 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC38Q5VT99 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
LRRC38Q5VT99 WASH6P-202ENST00000359512 1437 ntBASIC17.02■□□□□ 0.31
LRRC38Q5VT99 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
LRRC38Q5VT99 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
LRRC38Q5VT99 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC38Q5VT99 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
LRRC38Q5VT99 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
LRRC38Q5VT99 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.02■□□□□ 0.31
LRRC38Q5VT99 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRC38Q5VT99 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.02■□□□□ 0.31
LRRC38Q5VT99 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.02■□□□□ 0.31
LRRC38Q5VT99 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 AL589702.1-201ENST00000641229 1509 ntBASIC17.01■□□□□ 0.31
LRRC38Q5VT99 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 HAUS4P1-201ENST00000406739 1145 ntBASIC17.01■□□□□ 0.31
LRRC38Q5VT99 RPL13AP23-201ENST00000480739 586 ntBASIC17.01■□□□□ 0.31
LRRC38Q5VT99 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 AC018845.2-201ENST00000568326 409 ntBASIC17.01■□□□□ 0.31
LRRC38Q5VT99 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRC38Q5VT99 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC38Q5VT99 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17■□□□□ 0.31
LRRC38Q5VT99 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17■□□□□ 0.31
LRRC38Q5VT99 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17■□□□□ 0.31
LRRC38Q5VT99 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRC38Q5VT99 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17■□□□□ 0.31
LRRC38Q5VT99 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
LRRC38Q5VT99 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC38Q5VT99 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC38Q5VT99 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC38Q5VT99 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC38Q5VT99 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17■□□□□ 0.31
LRRC38Q5VT99 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC38Q5VT99 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17■□□□□ 0.31
LRRC38Q5VT99 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC38Q5VT99 HNRNPA1P28-201ENST00000424481 961 ntBASIC17■□□□□ 0.31
LRRC38Q5VT99 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17■□□□□ 0.31
LRRC38Q5VT99 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
LRRC38Q5VT99 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17■□□□□ 0.31
LRRC38Q5VT99 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRRC38Q5VT99 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17■□□□□ 0.31
LRRC38Q5VT99 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC38Q5VT99 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17■□□□□ 0.31
LRRC38Q5VT99 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17■□□□□ 0.31
LRRC38Q5VT99 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17■□□□□ 0.31
LRRC38Q5VT99 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17■□□□□ 0.31
LRRC38Q5VT99 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRC38Q5VT99 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms