Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 RNU1-129P-201ENST00000384064 167 ntBASIC15.86■□□□□ 0.13
HMGCS1Q01581 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 UNC93B6-202ENST00000528242 690 ntBASIC15.86■□□□□ 0.13
HMGCS1Q01581 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 U1.21-201ENST00000580816 167 ntBASIC15.86■□□□□ 0.13
HMGCS1Q01581 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HMGCS1Q01581 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.86■□□□□ 0.13
HMGCS1Q01581 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 IGLL3P-201ENST00000412472 434 ntBASIC15.85■□□□□ 0.13
HMGCS1Q01581 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.85■□□□□ 0.13
HMGCS1Q01581 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 VN2R19P-201ENST00000442399 1052 ntBASIC15.85■□□□□ 0.13
HMGCS1Q01581 AC009947.1-201ENST00000444350 727 ntBASIC15.85■□□□□ 0.13
HMGCS1Q01581 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 AL513480.1-201ENST00000451731 511 ntBASIC15.85■□□□□ 0.13
HMGCS1Q01581 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 RNA5SP419-201ENST00000515908 135 ntBASIC15.85■□□□□ 0.13
HMGCS1Q01581 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 AP001005.1-201ENST00000571755 1248 ntBASIC15.85■□□□□ 0.13
HMGCS1Q01581 AL031055.1-201ENST00000606362 631 ntBASIC15.85■□□□□ 0.13
HMGCS1Q01581 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.85■□□□□ 0.13
HMGCS1Q01581 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HMGCS1Q01581 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGCS1Q01581 HLA-A-201ENST00000376802 1334 ntBASIC15.84■□□□□ 0.13
HMGCS1Q01581 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGCS1Q01581 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms