Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.11■□□□□ 0.65
IRX3P78415 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IRX3P78415 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IRX3P78415 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.11■□□□□ 0.65
IRX3P78415 AL132655.2-201ENST00000596276 594 ntBASIC19.11■□□□□ 0.65
IRX3P78415 AL844908.2-201ENST00000609461 460 ntBASIC19.11■□□□□ 0.65
IRX3P78415 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.11■□□□□ 0.65
IRX3P78415 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IRX3P78415 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
IRX3P78415 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX3P78415 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC19.11■□□□□ 0.65
IRX3P78415 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.11■□□□□ 0.65
IRX3P78415 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
IRX3P78415 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IRX3P78415 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.11■□□□□ 0.65
IRX3P78415 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
IRX3P78415 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.11■□□□□ 0.65
IRX3P78415 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
IRX3P78415 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.11■□□□□ 0.65
IRX3P78415 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
IRX3P78415 AL671710.1-201ENST00000610245 2349 ntBASIC19.11■□□□□ 0.65
IRX3P78415 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.11■□□□□ 0.65
IRX3P78415 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
IRX3P78415 PCDHA1-201ENST00000378133 2726 ntBASIC19.1■□□□□ 0.65
IRX3P78415 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 CU639417.3-201ENST00000624240 1404 ntBASIC19.1■□□□□ 0.65
IRX3P78415 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.1■□□□□ 0.65
IRX3P78415 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.1■□□□□ 0.65
IRX3P78415 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
IRX3P78415 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.1■□□□□ 0.65
IRX3P78415 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.1■□□□□ 0.65
IRX3P78415 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.1■□□□□ 0.65
IRX3P78415 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.1■□□□□ 0.65
IRX3P78415 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.1■□□□□ 0.65
IRX3P78415 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.1■□□□□ 0.65
IRX3P78415 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.1■□□□□ 0.65
IRX3P78415 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.1■□□□□ 0.65
IRX3P78415 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.1■□□□□ 0.65
IRX3P78415 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.1■□□□□ 0.65
IRX3P78415 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 AC006277.1-201ENST00000624348 1610 ntBASIC19.1■□□□□ 0.65
IRX3P78415 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IRX3P78415 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 AC007541.1-201ENST00000570282 1469 ntBASIC19.09■□□□□ 0.65
IRX3P78415 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.09■□□□□ 0.65
IRX3P78415 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.09■□□□□ 0.65
IRX3P78415 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.09■□□□□ 0.65
IRX3P78415 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.09■□□□□ 0.65
IRX3P78415 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.09■□□□□ 0.65
IRX3P78415 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.09■□□□□ 0.65
IRX3P78415 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.09■□□□□ 0.65
IRX3P78415 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
IRX3P78415 LINC00554-201ENST00000564841 3011 ntBASIC19.09■□□□□ 0.65
IRX3P78415 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.09■□□□□ 0.65
IRX3P78415 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
IRX3P78415 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
IRX3P78415 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
IRX3P78415 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.08■□□□□ 0.65
IRX3P78415 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
IRX3P78415 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.08■□□□□ 0.65
IRX3P78415 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
IRX3P78415 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
IRX3P78415 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IRX3P78415 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
IRX3P78415 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.65
IRX3P78415 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IRX3P78415 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
IRX3P78415 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.08■□□□□ 0.64
IRX3P78415 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
IRX3P78415 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms