Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.78■□□□□ 0.44
SNRPFP62306 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.78■□□□□ 0.44
SNRPFP62306 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNRPFP62306 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.78■□□□□ 0.44
SNRPFP62306 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.78■□□□□ 0.44
SNRPFP62306 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 AL627223.1-201ENST00000416693 442 ntBASIC17.78■□□□□ 0.44
SNRPFP62306 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.78■□□□□ 0.44
SNRPFP62306 AC005237.2-201ENST00000434368 219 ntBASIC17.78■□□□□ 0.44
SNRPFP62306 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.78■□□□□ 0.44
SNRPFP62306 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.78■□□□□ 0.44
SNRPFP62306 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
SNRPFP62306 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.78■□□□□ 0.44
SNRPFP62306 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNRPFP62306 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SNRPFP62306 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.78■□□□□ 0.44
SNRPFP62306 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SNRPFP62306 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.77■□□□□ 0.44
SNRPFP62306 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.77■□□□□ 0.44
SNRPFP62306 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNRPFP62306 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SNRPFP62306 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNRPFP62306 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.77■□□□□ 0.44
SNRPFP62306 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.77■□□□□ 0.44
SNRPFP62306 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SNRPFP62306 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.77■□□□□ 0.44
SNRPFP62306 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.77■□□□□ 0.44
SNRPFP62306 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.77■□□□□ 0.44
SNRPFP62306 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.77■□□□□ 0.44
SNRPFP62306 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.77■□□□□ 0.44
SNRPFP62306 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SNRPFP62306 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 AC008677.1-201ENST00000519230 1561 ntBASIC17.77■□□□□ 0.44
SNRPFP62306 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SNRPFP62306 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.77■□□□□ 0.44
SNRPFP62306 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.77■□□□□ 0.43
SNRPFP62306 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNRPFP62306 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SNRPFP62306 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.43
SNRPFP62306 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SNRPFP62306 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.76■□□□□ 0.43
SNRPFP62306 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 AP001282.1-201ENST00000531301 1499 ntBASIC17.76■□□□□ 0.43
SNRPFP62306 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
SNRPFP62306 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SNRPFP62306 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.76■□□□□ 0.43
SNRPFP62306 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 AP3S2-216ENST00000617003 1561 ntBASIC17.76■□□□□ 0.43
SNRPFP62306 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SNRPFP62306 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.76■□□□□ 0.43
SNRPFP62306 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.76■□□□□ 0.43
SNRPFP62306 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.76■□□□□ 0.43
SNRPFP62306 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SNRPFP62306 AC093520.2-201ENST00000561830 333 ntBASIC17.76■□□□□ 0.43
SNRPFP62306 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SNRPFP62306 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms