Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
SRP54P61011 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SRP54P61011 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.2■□□□□ 0.18
SRP54P61011 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SRP54P61011 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SRP54P61011 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SRP54P61011 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SRP54P61011 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SRP54P61011 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.2■□□□□ 0.18
SRP54P61011 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.2■□□□□ 0.18
SRP54P61011 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SRP54P61011 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.2■□□□□ 0.18
SRP54P61011 AC097493.3-201ENST00000509725 367 ntBASIC16.2■□□□□ 0.18
SRP54P61011 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.2■□□□□ 0.18
SRP54P61011 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.2■□□□□ 0.18
SRP54P61011 AC020765.3-201ENST00000613051 740 ntBASIC16.2■□□□□ 0.18
SRP54P61011 AL390754.1-201ENST00000619088 582 ntBASIC16.2■□□□□ 0.18
SRP54P61011 AJ011932.1-201ENST00000621707 465 ntBASIC16.2■□□□□ 0.18
SRP54P61011 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.2■□□□□ 0.18
SRP54P61011 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SRP54P61011 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SRP54P61011 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SRP54P61011 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SRP54P61011 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SRP54P61011 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.19■□□□□ 0.18
SRP54P61011 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SRP54P61011 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SRP54P61011 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.19■□□□□ 0.18
SRP54P61011 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.19■□□□□ 0.18
SRP54P61011 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SRP54P61011 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.19■□□□□ 0.18
SRP54P61011 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
SRP54P61011 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
SRP54P61011 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
SRP54P61011 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.19■□□□□ 0.18
SRP54P61011 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SRP54P61011 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SRP54P61011 AL603756.1-201ENST00000606511 2163 ntBASIC16.19■□□□□ 0.18
SRP54P61011 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.18■□□□□ 0.18
SRP54P61011 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.18■□□□□ 0.18
SRP54P61011 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
SRP54P61011 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SRP54P61011 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.18■□□□□ 0.18
SRP54P61011 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SRP54P61011 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SRP54P61011 FAM220BP-201ENST00000377689 816 ntBASIC16.18■□□□□ 0.18
SRP54P61011 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.18■□□□□ 0.18
SRP54P61011 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.18■□□□□ 0.18
SRP54P61011 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.18■□□□□ 0.18
SRP54P61011 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.18■□□□□ 0.18
SRP54P61011 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms