Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIPK4P57078 KLF2P3-201ENST00000451977 1087 ntBASIC21.41■■□□□ 1.02
RIPK4P57078 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RIPK4P57078 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.41■■□□□ 1.02
RIPK4P57078 MAX-210ENST00000555419 765 ntTSL 5 BASIC21.41■■□□□ 1.02
RIPK4P57078 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RIPK4P57078 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RIPK4P57078 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC21.41■■□□□ 1.02
RIPK4P57078 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC21.41■■□□□ 1.02
RIPK4P57078 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RIPK4P57078 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.41■■□□□ 1.02
RIPK4P57078 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIPK4P57078 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RIPK4P57078 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RIPK4P57078 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.4■■□□□ 1.02
RIPK4P57078 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.4■■□□□ 1.02
RIPK4P57078 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 PCDH8P1-201ENST00000428983 2773 ntBASIC21.4■■□□□ 1.02
RIPK4P57078 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC21.4■■□□□ 1.02
RIPK4P57078 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC21.4■■□□□ 1.02
RIPK4P57078 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC21.4■■□□□ 1.02
RIPK4P57078 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RIPK4P57078 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC21.4■■□□□ 1.02
RIPK4P57078 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.4■■□□□ 1.02
RIPK4P57078 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 AC067863.1-201ENST00000494933 530 ntBASIC21.4■■□□□ 1.02
RIPK4P57078 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.4■■□□□ 1.02
RIPK4P57078 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.4■■□□□ 1.02
RIPK4P57078 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.4■■□□□ 1.02
RIPK4P57078 AC024267.1-201ENST00000582320 895 ntBASIC21.4■■□□□ 1.02
RIPK4P57078 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC21.4■■□□□ 1.02
RIPK4P57078 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC21.4■■□□□ 1.02
RIPK4P57078 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC21.4■■□□□ 1.02
RIPK4P57078 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.4■■□□□ 1.02
RIPK4P57078 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC21.4■■□□□ 1.02
RIPK4P57078 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21.4■■□□□ 1.02
RIPK4P57078 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC21.4■■□□□ 1.02
RIPK4P57078 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.4■■□□□ 1.02
RIPK4P57078 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
RIPK4P57078 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC21.4■■□□□ 1.02
RIPK4P57078 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
RIPK4P57078 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RIPK4P57078 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RIPK4P57078 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RIPK4P57078 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RIPK4P57078 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
RIPK4P57078 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.02
RIPK4P57078 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RIPK4P57078 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
RIPK4P57078 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.39■■□□□ 1.02
RIPK4P57078 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC21.39■■□□□ 1.02
RIPK4P57078 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC21.39■■□□□ 1.01
RIPK4P57078 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.39■■□□□ 1.01
RIPK4P57078 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC21.39■■□□□ 1.01
RIPK4P57078 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 BANF1P1-201ENST00000553684 263 ntBASIC21.39■■□□□ 1.01
RIPK4P57078 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.39■■□□□ 1.01
RIPK4P57078 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.39■■□□□ 1.01
RIPK4P57078 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.39■■□□□ 1.01
RIPK4P57078 COQ4-205ENST00000609948 956 ntTSL 2 BASIC21.39■■□□□ 1.01
RIPK4P57078 AC007967.4-201ENST00000614700 386 ntBASIC21.39■■□□□ 1.01
RIPK4P57078 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC21.39■■□□□ 1.01
RIPK4P57078 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.39■■□□□ 1.01
RIPK4P57078 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RIPK4P57078 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.39■■□□□ 1.01
RIPK4P57078 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
RIPK4P57078 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RIPK4P57078 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC21.38■■□□□ 1.01
RIPK4P57078 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RIPK4P57078 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms