Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CLDN12P56749 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN12P56749 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN12P56749 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.34□□□□□ -0.11
CLDN12P56749 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 KRT17P6-201ENST00000453795 1220 ntBASIC14.34□□□□□ -0.11
CLDN12P56749 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 MPDU1-223ENST00000582151 728 ntBASIC14.34□□□□□ -0.11
CLDN12P56749 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN12P56749 AL590326.2-201ENST00000625139 305 ntBASIC14.34□□□□□ -0.11
CLDN12P56749 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN12P56749 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.34□□□□□ -0.11
CLDN12P56749 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN12P56749 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLDN12P56749 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.34□□□□□ -0.11
CLDN12P56749 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLDN12P56749 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
CLDN12P56749 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.33□□□□□ -0.11
CLDN12P56749 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN12P56749 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN12P56749 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN12P56749 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN12P56749 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CLDN12P56749 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN12P56749 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN12P56749 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN12P56749 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.33□□□□□ -0.11
CLDN12P56749 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.33□□□□□ -0.11
CLDN12P56749 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.33□□□□□ -0.11
CLDN12P56749 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.33□□□□□ -0.11
CLDN12P56749 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN12P56749 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CLDN12P56749 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN12P56749 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN12P56749 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN12P56749 POU5F1P6-201ENST00000466990 990 ntBASIC14.33□□□□□ -0.12
CLDN12P56749 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.33□□□□□ -0.12
CLDN12P56749 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN12P56749 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN12P56749 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN12P56749 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN12P56749 MIR4492-201ENST00000581627 80 ntBASIC14.33□□□□□ -0.12
CLDN12P56749 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN12P56749 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
CLDN12P56749 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CLDN12P56749 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CLDN12P56749 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.33□□□□□ -0.12
CLDN12P56749 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CLDN12P56749 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CLDN12P56749 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLDN12P56749 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CLDN12P56749 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.33□□□□□ -0.12
CLDN12P56749 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 AC079776.2-201ENST00000641154 1609 ntBASIC14.33□□□□□ -0.12
CLDN12P56749 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CLDN12P56749 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.33□□□□□ -0.12
CLDN12P56749 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
CLDN12P56749 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CLDN12P56749 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
CLDN12P56749 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CLDN12P56749 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CLDN12P56749 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.32□□□□□ -0.12
CLDN12P56749 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CLDN12P56749 AC069224.1-201ENST00000566372 1715 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms