Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.65■□□□□ 0.9
KCNQ4P56696 PAM16-215ENST00000577031 548 ntTSL 4 BASIC20.65■□□□□ 0.9
KCNQ4P56696 AC010328.2-201ENST00000597698 1111 ntBASIC20.65■□□□□ 0.9
KCNQ4P56696 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.65■□□□□ 0.9
KCNQ4P56696 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ4P56696 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ4P56696 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ4P56696 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ4P56696 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ4P56696 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCNQ4P56696 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KCNQ4P56696 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
KCNQ4P56696 AL390961.4-201ENST00000623958 2535 ntBASIC20.64■□□□□ 0.9
KCNQ4P56696 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNQ4P56696 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
KCNQ4P56696 AC067852.2-201ENST00000590513 2313 ntBASIC20.64■□□□□ 0.89
KCNQ4P56696 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNQ4P56696 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNQ4P56696 ELK2AP-201ENST00000392510 1007 ntBASIC20.64■□□□□ 0.89
KCNQ4P56696 AC074338.1-201ENST00000416825 156 ntBASIC20.64■□□□□ 0.89
KCNQ4P56696 PFN1P12-201ENST00000455938 534 ntBASIC20.64■□□□□ 0.89
KCNQ4P56696 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNQ4P56696 AP000812.2-201ENST00000538934 718 ntBASIC20.64■□□□□ 0.89
KCNQ4P56696 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNQ4P56696 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNQ4P56696 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC20.64■□□□□ 0.89
KCNQ4P56696 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC20.64■□□□□ 0.89
KCNQ4P56696 AL118558.3-201ENST00000607414 1079 ntBASIC20.64■□□□□ 0.89
KCNQ4P56696 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.64■□□□□ 0.89
KCNQ4P56696 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ4P56696 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
KCNQ4P56696 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
KCNQ4P56696 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
KCNQ4P56696 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCNQ4P56696 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.63■□□□□ 0.89
KCNQ4P56696 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
KCNQ4P56696 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ4P56696 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ4P56696 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ4P56696 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ4P56696 AZGP1P1-201ENST00000411909 902 ntBASIC20.63■□□□□ 0.89
KCNQ4P56696 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNQ4P56696 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNQ4P56696 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNQ4P56696 FAM86LP-201ENST00000478302 853 ntBASIC20.63■□□□□ 0.89
KCNQ4P56696 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.63■□□□□ 0.89
KCNQ4P56696 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.63■□□□□ 0.89
KCNQ4P56696 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ4P56696 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.63■□□□□ 0.89
KCNQ4P56696 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNQ4P56696 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ4P56696 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNQ4P56696 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.63■□□□□ 0.89
KCNQ4P56696 BRI3BPP1-201ENST00000594224 787 ntBASIC20.63■□□□□ 0.89
KCNQ4P56696 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
KCNQ4P56696 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KCNQ4P56696 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KCNQ4P56696 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.63■□□□□ 0.89
KCNQ4P56696 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KCNQ4P56696 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KCNQ4P56696 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
KCNQ4P56696 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNQ4P56696 U82695.1-201ENST00000635752 1889 ntBASIC20.62■□□□□ 0.89
KCNQ4P56696 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ4P56696 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNQ4P56696 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
KCNQ4P56696 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNQ4P56696 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
KCNQ4P56696 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ4P56696 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNQ4P56696 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ4P56696 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNQ4P56696 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.62■□□□□ 0.89
KCNQ4P56696 AC018470.1-201ENST00000624790 3129 ntBASIC20.62■□□□□ 0.89
KCNQ4P56696 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.62■□□□□ 0.89
KCNQ4P56696 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ4P56696 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ4P56696 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ4P56696 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ4P56696 RPL13P2-201ENST00000440687 659 ntBASIC20.62■□□□□ 0.89
KCNQ4P56696 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ4P56696 AC106760.1-201ENST00000508690 800 ntBASIC20.62■□□□□ 0.89
KCNQ4P56696 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCNQ4P56696 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNQ4P56696 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNQ4P56696 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNQ4P56696 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.62■□□□□ 0.89
KCNQ4P56696 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
KCNQ4P56696 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms