Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRPF1P55201 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
BRPF1P55201 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRPF1P55201 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRPF1P55201 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRPF1P55201 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
BRPF1P55201 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRPF1P55201 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
BRPF1P55201 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
BRPF1P55201 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRPF1P55201 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRPF1P55201 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRPF1P55201 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRPF1P55201 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRPF1P55201 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC20.86■□□□□ 0.93
BRPF1P55201 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
BRPF1P55201 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRPF1P55201 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
BRPF1P55201 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRPF1P55201 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
BRPF1P55201 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRPF1P55201 MIR648-201ENST00000385046 94 ntBASIC20.86■□□□□ 0.93
BRPF1P55201 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.86■□□□□ 0.93
BRPF1P55201 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BRPF1P55201 AC005225.4-201ENST00000557330 545 ntBASIC20.86■□□□□ 0.93
BRPF1P55201 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.86■□□□□ 0.93
BRPF1P55201 AC025678.2-201ENST00000562061 970 ntBASIC20.86■□□□□ 0.93
BRPF1P55201 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.86■□□□□ 0.93
BRPF1P55201 AC004835.2-201ENST00000603762 682 ntBASIC20.86■□□□□ 0.93
BRPF1P55201 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
BRPF1P55201 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BRPF1P55201 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.86■□□□□ 0.93
BRPF1P55201 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
BRPF1P55201 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
BRPF1P55201 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
BRPF1P55201 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
BRPF1P55201 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.85■□□□□ 0.93
BRPF1P55201 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.85■□□□□ 0.93
BRPF1P55201 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.85■□□□□ 0.93
BRPF1P55201 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.85■□□□□ 0.93
BRPF1P55201 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.85■□□□□ 0.93
BRPF1P55201 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.85■□□□□ 0.93
BRPF1P55201 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.85■□□□□ 0.93
BRPF1P55201 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC20.85■□□□□ 0.93
BRPF1P55201 AC093520.2-201ENST00000561830 333 ntBASIC20.85■□□□□ 0.93
BRPF1P55201 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC20.85■□□□□ 0.93
BRPF1P55201 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
BRPF1P55201 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.85■□□□□ 0.93
BRPF1P55201 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
BRPF1P55201 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
BRPF1P55201 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
BRPF1P55201 AL603832.2-201ENST00000566195 2125 ntBASIC20.84■□□□□ 0.93
BRPF1P55201 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRPF1P55201 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
BRPF1P55201 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRPF1P55201 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
BRPF1P55201 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRPF1P55201 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
BRPF1P55201 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.84■□□□□ 0.93
BRPF1P55201 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
BRPF1P55201 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
BRPF1P55201 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRPF1P55201 AC004461.1-201ENST00000412461 403 ntBASIC20.84■□□□□ 0.93
BRPF1P55201 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC20.84■□□□□ 0.93
BRPF1P55201 RNA5SP421-201ENST00000516864 134 ntBASIC20.84■□□□□ 0.93
BRPF1P55201 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.84■□□□□ 0.93
BRPF1P55201 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
BRPF1P55201 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRPF1P55201 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRPF1P55201 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
BRPF1P55201 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
BRPF1P55201 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRPF1P55201 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BRPF1P55201 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
BRPF1P55201 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRPF1P55201 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BRPF1P55201 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.83■□□□□ 0.93
BRPF1P55201 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
BRPF1P55201 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms