Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.65■□□□□ 0.1
NR1H2P55055 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NR1H2P55055 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
NR1H2P55055 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
NR1H2P55055 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NR1H2P55055 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
NR1H2P55055 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.64■□□□□ 0.1
NR1H2P55055 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H2P55055 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H2P55055 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H2P55055 AC026748.1-201ENST00000624349 3251 ntBASIC15.64■□□□□ 0.09
NR1H2P55055 AC023908.3-201ENST00000564211 3047 ntBASIC15.64■□□□□ 0.09
NR1H2P55055 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H2P55055 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
NR1H2P55055 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.64■□□□□ 0.09
NR1H2P55055 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H2P55055 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H2P55055 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.64■□□□□ 0.09
NR1H2P55055 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H2P55055 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
NR1H2P55055 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H2P55055 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.64■□□□□ 0.09
NR1H2P55055 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC15.64■□□□□ 0.09
NR1H2P55055 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H2P55055 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H2P55055 AC009533.2-201ENST00000543664 586 ntBASIC15.64■□□□□ 0.09
NR1H2P55055 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.64■□□□□ 0.09
NR1H2P55055 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 MIR5100-201ENST00000579544 119 ntBASIC15.64■□□□□ 0.09
NR1H2P55055 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H2P55055 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H2P55055 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H2P55055 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.64■□□□□ 0.09
NR1H2P55055 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
NR1H2P55055 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.64■□□□□ 0.09
NR1H2P55055 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NR1H2P55055 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.63■□□□□ 0.09
NR1H2P55055 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NR1H2P55055 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H2P55055 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
NR1H2P55055 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.63■□□□□ 0.09
NR1H2P55055 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.63■□□□□ 0.09
NR1H2P55055 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
NR1H2P55055 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H2P55055 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
NR1H2P55055 AC068472.1-201ENST00000474589 881 ntBASIC15.63■□□□□ 0.09
NR1H2P55055 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H2P55055 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H2P55055 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.63■□□□□ 0.09
NR1H2P55055 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 SLC25A6P4-201ENST00000586535 553 ntBASIC15.63■□□□□ 0.09
NR1H2P55055 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H2P55055 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.63■□□□□ 0.09
NR1H2P55055 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
NR1H2P55055 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
NR1H2P55055 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms