Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB4P54760 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
EPHB4P54760 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB4P54760 REXO1L11P-201ENST00000620964 1927 ntBASIC18.45■□□□□ 0.54
EPHB4P54760 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB4P54760 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
EPHB4P54760 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB4P54760 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
EPHB4P54760 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
EPHB4P54760 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
EPHB4P54760 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.45■□□□□ 0.54
EPHB4P54760 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.45■□□□□ 0.54
EPHB4P54760 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB4P54760 AC005412.3-201ENST00000580309 715 ntBASIC18.45■□□□□ 0.54
EPHB4P54760 IGHV3-72-202ENST00000621503 303 ntBASIC18.45■□□□□ 0.54
EPHB4P54760 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB4P54760 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB4P54760 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB4P54760 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
EPHB4P54760 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
EPHB4P54760 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
EPHB4P54760 AL391005.1-201ENST00000623953 2435 ntBASIC18.44■□□□□ 0.54
EPHB4P54760 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 CROCCP1-201ENST00000426910 5675 ntBASIC18.44■□□□□ 0.54
EPHB4P54760 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB4P54760 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
EPHB4P54760 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.44■□□□□ 0.54
EPHB4P54760 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB4P54760 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB4P54760 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 API5-211ENST00000534695 560 ntTSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB4P54760 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.44■□□□□ 0.54
EPHB4P54760 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB4P54760 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 AC138969.3-201ENST00000546612 1459 ntBASIC18.44■□□□□ 0.54
EPHB4P54760 AC138932.2-201ENST00000548268 1459 ntBASIC18.44■□□□□ 0.54
EPHB4P54760 AC126755.4-201ENST00000549796 1459 ntBASIC18.44■□□□□ 0.54
EPHB4P54760 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB4P54760 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
EPHB4P54760 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB4P54760 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
EPHB4P54760 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC18.44■□□□□ 0.54
EPHB4P54760 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
EPHB4P54760 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB4P54760 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB4P54760 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB4P54760 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB4P54760 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.43■□□□□ 0.54
EPHB4P54760 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB4P54760 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.43■□□□□ 0.54
EPHB4P54760 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.43■□□□□ 0.54
EPHB4P54760 AC009407.1-201ENST00000568958 598 ntBASIC18.43■□□□□ 0.54
EPHB4P54760 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.43■□□□□ 0.54
EPHB4P54760 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
EPHB4P54760 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
EPHB4P54760 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB4P54760 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB4P54760 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.43■□□□□ 0.54
EPHB4P54760 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB4P54760 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.43■□□□□ 0.54
EPHB4P54760 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB4P54760 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
EPHB4P54760 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB4P54760 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB4P54760 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB4P54760 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB4P54760 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.42■□□□□ 0.54
EPHB4P54760 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB4P54760 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB4P54760 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB4P54760 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
EPHB4P54760 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
EPHB4P54760 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
EPHB4P54760 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
EPHB4P54760 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
EPHB4P54760 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB4P54760 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
EPHB4P54760 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB4P54760 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
EPHB4P54760 AC079776.1-201ENST00000401540 1152 ntBASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms