Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PMS1P54277 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.06■□□□□ 0.48
PMS1P54277 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PMS1P54277 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PMS1P54277 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.06■□□□□ 0.48
PMS1P54277 AP005117.1-202ENST00000581724 1908 ntBASIC18.06■□□□□ 0.48
PMS1P54277 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
PMS1P54277 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PMS1P54277 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PMS1P54277 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PMS1P54277 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PMS1P54277 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.05■□□□□ 0.48
PMS1P54277 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.05■□□□□ 0.48
PMS1P54277 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PMS1P54277 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.05■□□□□ 0.48
PMS1P54277 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PMS1P54277 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.05■□□□□ 0.48
PMS1P54277 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
PMS1P54277 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.05■□□□□ 0.48
PMS1P54277 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.05■□□□□ 0.48
PMS1P54277 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.05■□□□□ 0.48
PMS1P54277 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PMS1P54277 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.05■□□□□ 0.48
PMS1P54277 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.05■□□□□ 0.48
PMS1P54277 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.05■□□□□ 0.48
PMS1P54277 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
PMS1P54277 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.05■□□□□ 0.48
PMS1P54277 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PMS1P54277 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.05■□□□□ 0.48
PMS1P54277 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.05■□□□□ 0.48
PMS1P54277 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.05■□□□□ 0.48
PMS1P54277 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PMS1P54277 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PMS1P54277 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 PRAL-201ENST00000624952 3286 ntBASIC18.04■□□□□ 0.48
PMS1P54277 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.04■□□□□ 0.48
PMS1P54277 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.04■□□□□ 0.48
PMS1P54277 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PMS1P54277 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PMS1P54277 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.04■□□□□ 0.48
PMS1P54277 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PMS1P54277 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.04■□□□□ 0.48
PMS1P54277 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.04■□□□□ 0.48
PMS1P54277 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.04■□□□□ 0.48
PMS1P54277 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.04■□□□□ 0.48
PMS1P54277 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.04■□□□□ 0.48
PMS1P54277 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.04■□□□□ 0.48
PMS1P54277 AL078644.1-201ENST00000609881 752 ntBASIC18.04■□□□□ 0.48
PMS1P54277 AL513190.1-201ENST00000621254 727 ntBASIC18.04■□□□□ 0.48
PMS1P54277 AC007064.4-201ENST00000637740 555 ntBASIC18.04■□□□□ 0.48
PMS1P54277 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.04■□□□□ 0.48
PMS1P54277 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.04■□□□□ 0.48
PMS1P54277 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PMS1P54277 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
PMS1P54277 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.04■□□□□ 0.48
PMS1P54277 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 U82695.1-201ENST00000635752 1889 ntBASIC18.03■□□□□ 0.48
PMS1P54277 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
PMS1P54277 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.03■□□□□ 0.48
PMS1P54277 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.03■□□□□ 0.48
PMS1P54277 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
PMS1P54277 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.03■□□□□ 0.48
PMS1P54277 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PMS1P54277 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms