Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 U1.21-201ENST00000580816 167 ntBASIC16.97■□□□□ 0.31
COPAP53621 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPAP53621 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
COPAP53621 AC005498.2-205ENST00000593218 784 ntBASIC16.97■□□□□ 0.31
COPAP53621 AC092364.2-202ENST00000597012 1073 ntBASIC16.97■□□□□ 0.31
COPAP53621 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.97■□□□□ 0.31
COPAP53621 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPAP53621 AC079328.2-201ENST00000561241 3354 ntBASIC16.97■□□□□ 0.31
COPAP53621 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COPAP53621 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPAP53621 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
COPAP53621 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
COPAP53621 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPAP53621 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
COPAP53621 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
COPAP53621 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
COPAP53621 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.97■□□□□ 0.31
COPAP53621 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.97■□□□□ 0.31
COPAP53621 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
COPAP53621 RNF216P1-203ENST00000404404 2427 ntBASIC16.97■□□□□ 0.31
COPAP53621 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
COPAP53621 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 AL596257.1-201ENST00000641463 2694 ntBASIC16.96■□□□□ 0.31
COPAP53621 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.96■□□□□ 0.31
COPAP53621 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.96■□□□□ 0.31
COPAP53621 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.96■□□□□ 0.31
COPAP53621 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.96■□□□□ 0.31
COPAP53621 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.96■□□□□ 0.31
COPAP53621 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.96■□□□□ 0.31
COPAP53621 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 BCRP1-201ENST00000444246 691 ntBASIC16.96■□□□□ 0.31
COPAP53621 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.96■□□□□ 0.31
COPAP53621 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.96■□□□□ 0.31
COPAP53621 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.96■□□□□ 0.31
COPAP53621 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.96■□□□□ 0.31
COPAP53621 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.96■□□□□ 0.31
COPAP53621 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.96■□□□□ 0.31
COPAP53621 AC078925.2-201ENST00000624013 1973 ntBASIC16.96■□□□□ 0.31
COPAP53621 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
COPAP53621 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COPAP53621 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.96■□□□□ 0.31
COPAP53621 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
COPAP53621 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
COPAP53621 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COPAP53621 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
COPAP53621 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
COPAP53621 FRMD8P1-201ENST00000440433 1524 ntBASIC16.96■□□□□ 0.3
COPAP53621 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COPAP53621 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.96■□□□□ 0.3
COPAP53621 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COPAP53621 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COPAP53621 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
COPAP53621 CYP2T1P-202ENST00000641596 2535 ntBASIC16.95■□□□□ 0.3
COPAP53621 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
COPAP53621 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.95■□□□□ 0.3
COPAP53621 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
COPAP53621 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.95■□□□□ 0.3
COPAP53621 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.95■□□□□ 0.3
COPAP53621 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.95■□□□□ 0.3
COPAP53621 AL512356.2-201ENST00000546955 174 ntBASIC16.95■□□□□ 0.3
COPAP53621 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
COPAP53621 AL390955.2-201ENST00000603032 514 ntBASIC16.95■□□□□ 0.3
COPAP53621 AL031055.1-201ENST00000606362 631 ntBASIC16.95■□□□□ 0.3
COPAP53621 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.95■□□□□ 0.3
COPAP53621 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.95■□□□□ 0.3
COPAP53621 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.95■□□□□ 0.3
COPAP53621 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COPAP53621 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms