Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.93■□□□□ 0.14
PDX1P52945 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PDX1P52945 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.93■□□□□ 0.14
PDX1P52945 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.93■□□□□ 0.14
PDX1P52945 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.93■□□□□ 0.14
PDX1P52945 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.93■□□□□ 0.14
PDX1P52945 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.93■□□□□ 0.14
PDX1P52945 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 AC009118.2-201ENST00000613275 655 ntBASIC15.93■□□□□ 0.14
PDX1P52945 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.93■□□□□ 0.14
PDX1P52945 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
PDX1P52945 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.93■□□□□ 0.14
PDX1P52945 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.93■□□□□ 0.14
PDX1P52945 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 FLJ38576-201ENST00000623820 2459 ntBASIC15.93■□□□□ 0.14
PDX1P52945 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.93■□□□□ 0.14
PDX1P52945 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PDX1P52945 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
PDX1P52945 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.92■□□□□ 0.14
PDX1P52945 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.92■□□□□ 0.14
PDX1P52945 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PDX1P52945 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 AC022144.1-201ENST00000602255 1580 ntBASIC15.92■□□□□ 0.14
PDX1P52945 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.92■□□□□ 0.14
PDX1P52945 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PDX1P52945 AL021920.2-201ENST00000624828 1351 ntBASIC15.92■□□□□ 0.14
PDX1P52945 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 RNF216P1-203ENST00000404404 2427 ntBASIC15.92■□□□□ 0.14
PDX1P52945 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.92■□□□□ 0.14
PDX1P52945 HLA-J-202ENST00000469281 1241 ntBASIC15.92■□□□□ 0.14
PDX1P52945 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.92■□□□□ 0.14
PDX1P52945 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.92■□□□□ 0.14
PDX1P52945 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.92■□□□□ 0.14
PDX1P52945 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.92■□□□□ 0.14
PDX1P52945 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.92■□□□□ 0.14
PDX1P52945 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PDX1P52945 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PDX1P52945 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PDX1P52945 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.92■□□□□ 0.14
PDX1P52945 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PDX1P52945 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PDX1P52945 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.91■□□□□ 0.14
PDX1P52945 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PDX1P52945 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.91■□□□□ 0.14
PDX1P52945 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PDX1P52945 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.91■□□□□ 0.14
PDX1P52945 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.91■□□□□ 0.14
PDX1P52945 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
PDX1P52945 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PDX1P52945 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.91■□□□□ 0.14
PDX1P52945 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PDX1P52945 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 GK-202ENST00000378941 458 ntTSL 3 BASIC15.91■□□□□ 0.14
PDX1P52945 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.91■□□□□ 0.14
PDX1P52945 SPTLC1P1-201ENST00000447199 261 ntBASIC15.91■□□□□ 0.14
PDX1P52945 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.91■□□□□ 0.14
PDX1P52945 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 KRT18P34-201ENST00000488218 1270 ntBASIC15.91■□□□□ 0.14
PDX1P52945 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.91■□□□□ 0.14
PDX1P52945 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.91■□□□□ 0.14
PDX1P52945 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.91■□□□□ 0.14
PDX1P52945 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
PDX1P52945 AC003101.2-201ENST00000612557 442 ntBASIC15.91■□□□□ 0.14
PDX1P52945 AL662799.1-202ENST00000614205 422 ntBASIC15.91■□□□□ 0.14
PDX1P52945 AC025048.6-201ENST00000634326 1161 ntBASIC15.91■□□□□ 0.14
PDX1P52945 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.91■□□□□ 0.14
PDX1P52945 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PDX1P52945 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms