Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 KRT17P8-201ENST00000540749 863 ntBASIC18.05■□□□□ 0.48
CPT1AP50416 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 CTBP2P3-201ENST00000585629 1255 ntBASIC18.05■□□□□ 0.48
CPT1AP50416 AC025048.3-201ENST00000590609 569 ntBASIC18.05■□□□□ 0.48
CPT1AP50416 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.05■□□□□ 0.48
CPT1AP50416 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.05■□□□□ 0.48
CPT1AP50416 AC005702.4-201ENST00000618393 416 ntBASIC18.05■□□□□ 0.48
CPT1AP50416 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CPT1AP50416 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CPT1AP50416 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CPT1AP50416 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.05■□□□□ 0.48
CPT1AP50416 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CPT1AP50416 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.05■□□□□ 0.48
CPT1AP50416 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CPT1AP50416 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPT1AP50416 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CPT1AP50416 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 LETM1P2-201ENST00000597330 2178 ntBASIC18.04■□□□□ 0.48
CPT1AP50416 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CPT1AP50416 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CPT1AP50416 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 GGT3P-204ENST00000453783 1664 ntBASIC18.04■□□□□ 0.48
CPT1AP50416 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.04■□□□□ 0.48
CPT1AP50416 AC079776.1-201ENST00000401540 1152 ntBASIC18.04■□□□□ 0.48
CPT1AP50416 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.04■□□□□ 0.48
CPT1AP50416 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.04■□□□□ 0.48
CPT1AP50416 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.04■□□□□ 0.48
CPT1AP50416 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.04■□□□□ 0.48
CPT1AP50416 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CPT1AP50416 RAB43P1-201ENST00000561790 589 ntBASIC18.04■□□□□ 0.48
CPT1AP50416 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.04■□□□□ 0.48
CPT1AP50416 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC18.04■□□□□ 0.48
CPT1AP50416 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CPT1AP50416 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.04■□□□□ 0.48
CPT1AP50416 MIR6805-201ENST00000615055 62 ntBASIC18.04■□□□□ 0.48
CPT1AP50416 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.04■□□□□ 0.48
CPT1AP50416 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.04■□□□□ 0.48
CPT1AP50416 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CPT1AP50416 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPT1AP50416 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.04■□□□□ 0.48
CPT1AP50416 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPT1AP50416 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CPT1AP50416 AL136982.4-201ENST00000437689 1740 ntBASIC18.03■□□□□ 0.48
CPT1AP50416 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
CPT1AP50416 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPT1AP50416 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPT1AP50416 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.03■□□□□ 0.48
CPT1AP50416 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPT1AP50416 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CPT1AP50416 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CPT1AP50416 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPT1AP50416 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CPT1AP50416 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.03■□□□□ 0.48
CPT1AP50416 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CPT1AP50416 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.03■□□□□ 0.48
CPT1AP50416 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.03■□□□□ 0.48
CPT1AP50416 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.03■□□□□ 0.48
CPT1AP50416 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.03■□□□□ 0.48
CPT1AP50416 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.03■□□□□ 0.48
CPT1AP50416 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPT1AP50416 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CPT1AP50416 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPT1AP50416 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPT1AP50416 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CPT1AP50416 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPT1AP50416 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPT1AP50416 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPT1AP50416 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.03■□□□□ 0.48
CPT1AP50416 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPT1AP50416 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPT1AP50416 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPT1AP50416 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.02■□□□□ 0.48
CPT1AP50416 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPT1AP50416 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.02■□□□□ 0.48
CPT1AP50416 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPT1AP50416 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.02■□□□□ 0.48
CPT1AP50416 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.02■□□□□ 0.48
CPT1AP50416 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CPT1AP50416 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.02■□□□□ 0.48
CPT1AP50416 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CPT1AP50416 AC112492.5-201ENST00000421897 457 ntBASIC18.02■□□□□ 0.48
CPT1AP50416 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPT1AP50416 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.02■□□□□ 0.48
CPT1AP50416 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPT1AP50416 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18.02■□□□□ 0.48
CPT1AP50416 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms