Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNTAP49354 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.11■□□□□ 0.33
FNTAP49354 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.11■□□□□ 0.33
FNTAP49354 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.11■□□□□ 0.33
FNTAP49354 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
FNTAP49354 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.11■□□□□ 0.33
FNTAP49354 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.11■□□□□ 0.33
FNTAP49354 FOSL1P1-201ENST00000511041 816 ntBASIC17.11■□□□□ 0.33
FNTAP49354 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.11■□□□□ 0.33
FNTAP49354 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.11■□□□□ 0.33
FNTAP49354 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.11■□□□□ 0.33
FNTAP49354 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.11■□□□□ 0.33
FNTAP49354 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.11■□□□□ 0.33
FNTAP49354 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.11■□□□□ 0.33
FNTAP49354 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNTAP49354 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FNTAP49354 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNTAP49354 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.11■□□□□ 0.33
FNTAP49354 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNTAP49354 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNTAP49354 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FNTAP49354 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
FNTAP49354 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
FNTAP49354 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNTAP49354 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNTAP49354 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
FNTAP49354 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.11■□□□□ 0.33
FNTAP49354 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.1■□□□□ 0.33
FNTAP49354 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.1■□□□□ 0.33
FNTAP49354 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FNTAP49354 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
FNTAP49354 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.1■□□□□ 0.33
FNTAP49354 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
FNTAP49354 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FNTAP49354 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.1■□□□□ 0.33
FNTAP49354 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.1■□□□□ 0.33
FNTAP49354 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.1■□□□□ 0.33
FNTAP49354 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
FNTAP49354 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.1■□□□□ 0.33
FNTAP49354 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.1■□□□□ 0.33
FNTAP49354 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.1■□□□□ 0.33
FNTAP49354 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.1■□□□□ 0.33
FNTAP49354 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.1■□□□□ 0.33
FNTAP49354 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.1■□□□□ 0.33
FNTAP49354 AC091076.1-201ENST00000610741 619 ntBASIC17.1■□□□□ 0.33
FNTAP49354 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.1■□□□□ 0.33
FNTAP49354 PGM5P2-202ENST00000637225 1043 ntBASIC17.1■□□□□ 0.33
FNTAP49354 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.1■□□□□ 0.33
FNTAP49354 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 AC104581.4-201ENST00000623126 3052 ntBASIC17.1■□□□□ 0.33
FNTAP49354 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
FNTAP49354 AC129492.6-201ENST00000611383 1305 ntBASIC17.1■□□□□ 0.33
FNTAP49354 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.1■□□□□ 0.33
FNTAP49354 SNX18-202ENST00000343017 3140 ntBASIC17.1■□□□□ 0.33
FNTAP49354 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
FNTAP49354 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
FNTAP49354 AL592424.1-201ENST00000563624 1536 ntBASIC17.1■□□□□ 0.33
FNTAP49354 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
FNTAP49354 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.1■□□□□ 0.33
FNTAP49354 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
FNTAP49354 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.09■□□□□ 0.33
FNTAP49354 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.09■□□□□ 0.33
FNTAP49354 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.09■□□□□ 0.33
FNTAP49354 AC006557.2-201ENST00000592985 1240 ntBASIC17.09■□□□□ 0.33
FNTAP49354 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.09■□□□□ 0.33
FNTAP49354 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.09■□□□□ 0.33
FNTAP49354 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
FNTAP49354 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.09■□□□□ 0.33
FNTAP49354 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.09■□□□□ 0.33
FNTAP49354 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.09■□□□□ 0.33
FNTAP49354 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms