Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.16■□□□□ 0.18
SOX11P35716 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.16■□□□□ 0.18
SOX11P35716 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.16■□□□□ 0.18
SOX11P35716 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.16■□□□□ 0.18
SOX11P35716 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SOX11P35716 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SOX11P35716 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.15■□□□□ 0.18
SOX11P35716 AL161772.1-201ENST00000610494 4412 ntBASIC16.15■□□□□ 0.18
SOX11P35716 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.15■□□□□ 0.18
SOX11P35716 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SOX11P35716 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SOX11P35716 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SOX11P35716 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.15■□□□□ 0.18
SOX11P35716 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SOX11P35716 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.15■□□□□ 0.18
SOX11P35716 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SOX11P35716 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.15■□□□□ 0.18
SOX11P35716 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.15■□□□□ 0.18
SOX11P35716 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.15■□□□□ 0.18
SOX11P35716 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.15■□□□□ 0.18
SOX11P35716 SIGLEC30P-201ENST00000455569 941 ntBASIC16.15■□□□□ 0.18
SOX11P35716 STK19B-204ENST00000512515 211 ntBASIC16.15■□□□□ 0.18
SOX11P35716 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SOX11P35716 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.15■□□□□ 0.18
SOX11P35716 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.15■□□□□ 0.18
SOX11P35716 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
SOX11P35716 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SOX11P35716 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
SOX11P35716 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.15■□□□□ 0.18
SOX11P35716 AC024909.3-201ENST00000611513 2257 ntBASIC16.15■□□□□ 0.18
SOX11P35716 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SOX11P35716 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.14■□□□□ 0.18
SOX11P35716 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SOX11P35716 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
SOX11P35716 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SOX11P35716 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 NCF1C-201ENST00000438382 1427 ntBASIC16.14■□□□□ 0.17
SOX11P35716 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.14■□□□□ 0.17
SOX11P35716 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SOX11P35716 MIR1233-2-201ENST00000408138 82 ntBASIC16.14■□□□□ 0.17
SOX11P35716 MIR1233-1-201ENST00000408722 82 ntBASIC16.14■□□□□ 0.17
SOX11P35716 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 ELK2BP-201ENST00000415014 1224 ntBASIC16.14■□□□□ 0.17
SOX11P35716 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.14■□□□□ 0.17
SOX11P35716 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.14■□□□□ 0.17
SOX11P35716 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.14■□□□□ 0.17
SOX11P35716 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.14■□□□□ 0.17
SOX11P35716 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.14■□□□□ 0.17
SOX11P35716 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 GPR89P-201ENST00000407924 1495 ntBASIC16.14■□□□□ 0.17
SOX11P35716 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.14■□□□□ 0.17
SOX11P35716 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SOX11P35716 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
SOX11P35716 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SOX11P35716 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.13■□□□□ 0.17
SOX11P35716 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SOX11P35716 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms