Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPB2P35606 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPB2P35606 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPB2P35606 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.69■□□□□ 0.58
COPB2P35606 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPB2P35606 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COPB2P35606 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COPB2P35606 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.69■□□□□ 0.58
COPB2P35606 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.69■□□□□ 0.58
COPB2P35606 API5-211ENST00000534695 560 ntTSL 5 BASIC18.69■□□□□ 0.58
COPB2P35606 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.69■□□□□ 0.58
COPB2P35606 AL512361.1-201ENST00000554200 418 ntBASIC18.69■□□□□ 0.58
COPB2P35606 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.69■□□□□ 0.58
COPB2P35606 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.69■□□□□ 0.58
COPB2P35606 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.69■□□□□ 0.58
COPB2P35606 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.69■□□□□ 0.58
COPB2P35606 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.69■□□□□ 0.58
COPB2P35606 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPB2P35606 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.69■□□□□ 0.58
COPB2P35606 AC011676.5-201ENST00000624864 2660 ntBASIC18.69■□□□□ 0.58
COPB2P35606 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COPB2P35606 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPB2P35606 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.69■□□□□ 0.58
COPB2P35606 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
COPB2P35606 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.69■□□□□ 0.58
COPB2P35606 AL031731.1-201ENST00000642131 2094 ntBASIC18.69■□□□□ 0.58
COPB2P35606 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPB2P35606 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPB2P35606 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPB2P35606 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPB2P35606 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPB2P35606 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPB2P35606 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPB2P35606 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPB2P35606 AC114501.2-201ENST00000439631 535 ntBASIC18.68■□□□□ 0.58
COPB2P35606 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.68■□□□□ 0.58
COPB2P35606 AL139010.1-201ENST00000454878 894 ntBASIC18.68■□□□□ 0.58
COPB2P35606 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.68■□□□□ 0.58
COPB2P35606 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.68■□□□□ 0.58
COPB2P35606 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPB2P35606 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.68■□□□□ 0.58
COPB2P35606 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
COPB2P35606 AL033527.5-202ENST00000641632 1098 ntBASIC18.68■□□□□ 0.58
COPB2P35606 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPB2P35606 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.68■□□□□ 0.58
COPB2P35606 AL645728.1-201ENST00000366221 2101 ntBASIC18.68■□□□□ 0.58
COPB2P35606 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPB2P35606 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COPB2P35606 NKILA-202ENST00000614771 2598 ntBASIC18.68■□□□□ 0.58
COPB2P35606 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.68■□□□□ 0.58
COPB2P35606 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.68■□□□□ 0.58
COPB2P35606 AC006538.1-201ENST00000567905 1585 ntBASIC18.68■□□□□ 0.58
COPB2P35606 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COPB2P35606 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.67■□□□□ 0.58
COPB2P35606 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COPB2P35606 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.67■□□□□ 0.58
COPB2P35606 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.67■□□□□ 0.58
COPB2P35606 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.67■□□□□ 0.58
COPB2P35606 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.67■□□□□ 0.58
COPB2P35606 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.67■□□□□ 0.58
COPB2P35606 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 SDHAP3-202ENST00000515467 728 ntBASIC18.67■□□□□ 0.58
COPB2P35606 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC18.67■□□□□ 0.58
COPB2P35606 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.67■□□□□ 0.58
COPB2P35606 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.67■□□□□ 0.58
COPB2P35606 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.67■□□□□ 0.58
COPB2P35606 AC104794.3-201ENST00000566840 1248 ntBASIC18.67■□□□□ 0.58
COPB2P35606 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.67■□□□□ 0.58
COPB2P35606 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.67■□□□□ 0.58
COPB2P35606 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.67■□□□□ 0.58
COPB2P35606 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.67■□□□□ 0.58
COPB2P35606 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.67■□□□□ 0.58
COPB2P35606 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COPB2P35606 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COPB2P35606 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COPB2P35606 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.67■□□□□ 0.58
COPB2P35606 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COPB2P35606 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.67■□□□□ 0.58
COPB2P35606 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
COPB2P35606 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.66■□□□□ 0.58
COPB2P35606 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
COPB2P35606 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.66■□□□□ 0.58
COPB2P35606 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
COPB2P35606 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
COPB2P35606 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COPB2P35606 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms