Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
APEX1P27695 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
APEX1P27695 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
APEX1P27695 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.91□□□□□ -0.02
APEX1P27695 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
APEX1P27695 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.91□□□□□ -0.02
APEX1P27695 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.91□□□□□ -0.02
APEX1P27695 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.91□□□□□ -0.02
APEX1P27695 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.91□□□□□ -0.02
APEX1P27695 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
APEX1P27695 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.91□□□□□ -0.02
APEX1P27695 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.91□□□□□ -0.02
APEX1P27695 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.91□□□□□ -0.02
APEX1P27695 AC012640.2-201ENST00000561606 901 ntBASIC14.91□□□□□ -0.02
APEX1P27695 FAM215A-202ENST00000632077 792 ntBASIC14.91□□□□□ -0.02
APEX1P27695 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.91□□□□□ -0.02
APEX1P27695 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.91□□□□□ -0.02
APEX1P27695 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.91□□□□□ -0.02
APEX1P27695 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.91□□□□□ -0.02
APEX1P27695 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
APEX1P27695 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.91□□□□□ -0.02
APEX1P27695 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
APEX1P27695 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.9□□□□□ -0.02
APEX1P27695 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 AL645728.1-201ENST00000366221 2101 ntBASIC14.9□□□□□ -0.02
APEX1P27695 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.9□□□□□ -0.02
APEX1P27695 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.9□□□□□ -0.02
APEX1P27695 AC073347.1-201ENST00000421633 2643 ntBASIC14.9□□□□□ -0.02
APEX1P27695 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 PTCHD3P3-201ENST00000403073 906 ntBASIC14.9□□□□□ -0.02
APEX1P27695 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.9□□□□□ -0.02
APEX1P27695 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.9□□□□□ -0.02
APEX1P27695 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 SLC25A1P1-201ENST00000528351 927 ntBASIC14.9□□□□□ -0.02
APEX1P27695 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.9□□□□□ -0.02
APEX1P27695 AC105339.3-201ENST00000560043 636 ntBASIC14.9□□□□□ -0.02
APEX1P27695 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.9□□□□□ -0.02
APEX1P27695 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.9□□□□□ -0.02
APEX1P27695 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.9□□□□□ -0.02
APEX1P27695 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.9□□□□□ -0.02
APEX1P27695 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.9□□□□□ -0.02
APEX1P27695 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.9□□□□□ -0.02
APEX1P27695 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.9□□□□□ -0.02
APEX1P27695 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
APEX1P27695 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.9□□□□□ -0.02
APEX1P27695 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.9□□□□□ -0.02
APEX1P27695 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms