Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.94□□□□□ -0.18
VAMP1P23763 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 MIR718-201ENST00000390190 70 ntBASIC13.94□□□□□ -0.18
VAMP1P23763 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.94□□□□□ -0.18
VAMP1P23763 AC125634.1-201ENST00000438758 1403 ntBASIC13.94□□□□□ -0.18
VAMP1P23763 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.94□□□□□ -0.18
VAMP1P23763 DUX4L17-201ENST00000557360 1267 ntBASIC13.94□□□□□ -0.18
VAMP1P23763 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.94□□□□□ -0.18
VAMP1P23763 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.94□□□□□ -0.18
VAMP1P23763 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
VAMP1P23763 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
VAMP1P23763 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 AC006277.1-201ENST00000624348 1610 ntBASIC13.93□□□□□ -0.18
VAMP1P23763 AL671710.1-201ENST00000610245 2349 ntBASIC13.93□□□□□ -0.18
VAMP1P23763 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
VAMP1P23763 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 AL009178.2-201ENST00000597278 2719 ntBASIC13.93□□□□□ -0.18
VAMP1P23763 AL354707.1-201ENST00000615168 2013 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VAMP1P23763 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 LINC02447-202ENST00000501888 2146 ntBASIC13.93□□□□□ -0.18
VAMP1P23763 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 KRT8P49-201ENST00000604166 1432 ntBASIC13.93□□□□□ -0.18
VAMP1P23763 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 MIR662-201ENST00000384847 95 ntBASIC13.93□□□□□ -0.18
VAMP1P23763 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 AC092597.1-201ENST00000487352 616 ntBASIC13.93□□□□□ -0.18
VAMP1P23763 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.93□□□□□ -0.18
VAMP1P23763 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.93□□□□□ -0.18
VAMP1P23763 AL390719.2-201ENST00000606993 987 ntBASIC13.93□□□□□ -0.18
VAMP1P23763 SNX21-213ENST00000614929 587 ntTSL 5 BASIC13.93□□□□□ -0.18
VAMP1P23763 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.93□□□□□ -0.18
VAMP1P23763 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VAMP1P23763 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VAMP1P23763 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
VAMP1P23763 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VAMP1P23763 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
VAMP1P23763 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
VAMP1P23763 KRT17P2-201ENST00000300992 1314 ntBASIC13.92□□□□□ -0.18
VAMP1P23763 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VAMP1P23763 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.92□□□□□ -0.18
VAMP1P23763 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 AC023157.3-201ENST00000619086 2088 ntBASIC13.92□□□□□ -0.18
VAMP1P23763 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.92□□□□□ -0.18
VAMP1P23763 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.92□□□□□ -0.18
VAMP1P23763 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC13.92□□□□□ -0.18
VAMP1P23763 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.92□□□□□ -0.18
VAMP1P23763 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC13.92□□□□□ -0.18
VAMP1P23763 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms