Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.214e-6■■□□□ 13.1
RPS3P23396 LINC01226-204ENST00000639839 554 ntTSL 413.3□□□□□ -0.284e-6■■□□□ 13.1
RPS3P23396 CDS2-205ENST00000468817 2706 ntTSL 213.19□□□□□ -0.34e-6■■□□□ 13.1
RPS3P23396 CRELD1-209ENST00000482691 690 ntTSL 313.18□□□□□ -0.34e-6■■□□□ 13.1
RPS3P23396 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.384e-6■■□□□ 13.1
RPS3P23396 METTL17-216ENST00000555533 1605 ntTSL 1 (best)12.59□□□□□ -0.394e-6■■□□□ 13.1
RPS3P23396 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.424e-6■■□□□ 13.1
RPS3P23396 DGCR2-207ENST00000608548 518 ntTSL 211.81□□□□□ -0.524e-6■■□□□ 13.1
RPS3P23396 CRELD1-210ENST00000489674 437 ntTSL 511.76□□□□□ -0.534e-6■■□□□ 13.1
RPS3P23396 LINC01226-207ENST00000640226 551 ntTSL 411.67□□□□□ -0.544e-6■■□□□ 13.1
RPS3P23396 CRELD1-208ENST00000467713 540 ntTSL 211.44□□□□□ -0.584e-6■■□□□ 13.1
RPS3P23396 METTL17-217ENST00000555640 2887 ntTSL 511.29□□□□□ -0.64e-6■■□□□ 13.1
RPS3P23396 ACTN1-221ENST00000556571 568 ntTSL 411.24□□□□□ -0.614e-6■■□□□ 13.1
RPS3P23396 IER3IP1-201ENST00000256433 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.624e-6■■□□□ 13.1
RPS3P23396 METTL17-224ENST00000557550 1529 ntTSL 511.14□□□□□ -0.634e-6■■□□□ 13.1
RPS3P23396 ELAC2-211ENST00000492559 615 ntTSL 410.69□□□□□ -0.74e-6■■□□□ 13.1
RPS3P23396 TMEM9-205ENST00000414605 545 ntTSL 210.6□□□□□ -0.714e-6■■□□□ 13.1
RPS3P23396 METTL17-204ENST00000553441 635 ntTSL 210.59□□□□□ -0.714e-6■■□□□ 13.1
RPS3P23396 TMEM9-207ENST00000455367 487 ntTSL 510.55□□□□□ -0.724e-6■■□□□ 13.1
RPS3P23396 METTL17-210ENST00000554751 556 ntTSL 510.23□□□□□ -0.774e-6■■□□□ 13.1
RPS3P23396 METTL17-225ENST00000557701 552 ntTSL 29.44□□□□□ -0.94e-6■■□□□ 13.1
RPS3P23396 ACTN1-210ENST00000553779 530 ntTSL 49.43□□□□□ -0.94e-6■■□□□ 13.1
RPS3P23396 GPX4-204ENST00000587648 536 ntTSL 28.87□□□□□ -0.994e-6■■□□□ 13.1
RPS3P23396 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.014e-6■■□□□ 13.1
RPS3P23396 NOLC1-205ENST00000476468 844 ntTSL 58.64□□□□□ -1.031e-6■■□□□ 13.1
RPS3P23396 METTL17-209ENST00000554588 1077 ntTSL 28.62□□□□□ -1.034e-6■■□□□ 13.1
RPS3P23396 METTL17-214ENST00000555177 572 ntTSL 28.55□□□□□ -1.044e-6■■□□□ 13.1
RPS3P23396 METTL17-220ENST00000556442 582 ntTSL 28.55□□□□□ -1.044e-6■■□□□ 13.1
RPS3P23396 METTL17-213ENST00000554985 596 ntTSL 28.55□□□□□ -1.044e-6■■□□□ 13.1
RPS3P23396 METTL17-207ENST00000554283 568 ntTSL 48.55□□□□□ -1.044e-6■■□□□ 13.1
RPS3P23396 METTL17-205ENST00000553536 824 ntTSL 28.06□□□□□ -1.124e-6■■□□□ 13.1
RPS3P23396 NOLC1-203ENST00000461421 777 ntTSL 37.51□□□□□ -1.211e-6■■□□□ 13.1
RPS3P23396 METTL17-206ENST00000553564 900 ntTSL 57.26□□□□□ -1.254e-6■■□□□ 13.1
RPS3P23396 METTL17-212ENST00000554949 576 ntTSL 37.19□□□□□ -1.264e-6■■□□□ 13.1
RPS3P23396 METTL17-218ENST00000555670 803 ntTSL 57.19□□□□□ -1.264e-6■■□□□ 13.1
RPS3P23396 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.47□□□□□ -1.374e-6■■□□□ 13.1
RPS3P23396 AC012254.2-202ENST00000602926 291 ntAPPRIS ALT2 TSL 26.38□□□□□ -1.394e-6■■□□□ 13.1
RPS3P23396 IQGAP1-207ENST00000559682 376 ntTSL 25.07□□□□□ -1.64e-6■■□□□ 13.1
RPS3P23396 PDCD6IP-209ENST00000473593 540 ntTSL 24.31□□□□□ -1.721e-19■■□□□ 13.1
RPS3P23396 PDCD6IP-214ENST00000489869 842 ntTSL 21.22□□□□□ -2.214e-29■■□□□ 13.1
RPS3P23396 PFN1-202ENST00000572383 539 ntTSL 317.72■□□□□ 0.432e-17■■□□□ 13.1
RPS3P23396 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.392e-17■■□□□ 13.1
RPS3P23396 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.065e-7■■□□□ 13.1
RPS3P23396 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC13.7□□□□□ -0.225e-6■■□□□ 13.1
RPS3P23396 RACK1-229ENST00000513027 697 ntTSL 312.38□□□□□ -0.432e-19■■□□□ 13.1
RPS3P23396 RACK1-234ENST00000515417 873 ntTSL 39.46□□□□□ -0.92e-19■■□□□ 13.1
RPS3P23396 RACK1-206ENST00000503081 587 ntTSL 37.07□□□□□ -1.282e-11■■□□□ 13.1
RPS3P23396 RACK1-213ENST00000506312 559 ntTSL 56.96□□□□□ -1.32e-11■■□□□ 13.1
RPS3P23396 APLP2-212ENST00000529483 323 ntTSL 55.77□□□□□ -1.491e-13■■□□□ 13.1
RPS3P23396 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.017e-16■■□□□ 13.1
RPS3P23396 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.582e-7■■□□□ 13.1
RPS3P23396 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.546e-6■■□□□ 13.1
RPS3P23396 DCUN1D5-210ENST00000531571 1535 ntTSL 524.51■■□□□ 1.512e-7■■□□□ 13.1
RPS3P23396 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.88■■□□□ 1.256e-6■■□□□ 13.1
RPS3P23396 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.8■■□□□ 1.246e-6■■□□□ 13.1
RPS3P23396 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.122e-7■■□□□ 13.1
RPS3P23396 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.67■■□□□ 1.066e-6■■□□□ 13.1
RPS3P23396 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.052e-7■■□□□ 13.1
RPS3P23396 UBFD1-210ENST00000571064 794 ntTSL 321.03■□□□□ 0.961e-12■■□□□ 13.1
RPS3P23396 DCUN1D5-204ENST00000527576 790 ntTSL 520.97■□□□□ 0.952e-7■■□□□ 13.1
RPS3P23396 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.96■□□□□ 0.956e-6■■□□□ 13.1
RPS3P23396 SLC2A8-206ENST00000423934 933 ntTSL 520.58■□□□□ 0.892e-7■■□□□ 13.1
RPS3P23396 SLC2A8-208ENST00000439597 854 ntTSL 320.58■□□□□ 0.892e-7■■□□□ 13.1
RPS3P23396 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.03■□□□□ 0.86e-6■■□□□ 13.1
RPS3P23396 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.77■□□□□ 0.766e-6■■□□□ 13.1
RPS3P23396 CMAS-202ENST00000534981 1575 ntTSL 1 (best)19.44■□□□□ 0.77e-16■■□□□ 13.1
RPS3P23396 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.95■□□□□ 0.626e-6■■□□□ 13.1
RPS3P23396 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.66e-6■■□□□ 13.1
RPS3P23396 NOC2L-202ENST00000469563 878 ntTSL 218.35■□□□□ 0.536e-6■■□□□ 13.1
RPS3P23396 NAPA-215ENST00000597271 1467 ntTSL 218.26■□□□□ 0.516e-6■■□□□ 13.1
RPS3P23396 MTCH2-203ENST00000530428 930 ntTSL 518.23■□□□□ 0.512e-7■■□□□ 13.1
RPS3P23396 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.09■□□□□ 0.496e-6■■□□□ 13.1
RPS3P23396 DCUN1D5-206ENST00000529076 482 ntTSL 318■□□□□ 0.472e-7■■□□□ 13.1
RPS3P23396 CMAS-203ENST00000535610 854 ntTSL 517.92■□□□□ 0.467e-16■■□□□ 13.1
RPS3P23396 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.459e-7■■□□□ 13.1
RPS3P23396 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.423e-6■■□□□ 13.1
RPS3P23396 SLC6A8-202ENST00000413787 468 ntTSL 517.42■□□□□ 0.386e-6■■□□□ 13.1
RPS3P23396 GGT1-210ENST00000412658 2091 ntTSL 517.28■□□□□ 0.361e-12■■□□□ 13.1
RPS3P23396 JAGN1-202ENST00000489724 342 ntTSL 316.98■□□□□ 0.312e-7■■□□□ 13.1
RPS3P23396 FMO5-205ENST00000527849 2410 ntTSL 516.95■□□□□ 0.32e-7■■□□□ 13.1
RPS3P23396 SLC2A8-207ENST00000430147 1030 ntTSL 316.87■□□□□ 0.292e-7■■□□□ 13.1
RPS3P23396 SYS1-DBNDD2-203ENST00000458187 673 ntAPPRIS P5 TSL 516.81■□□□□ 0.286e-6■■□□□ 13.1
RPS3P23396 DCUN1D5-205ENST00000527779 842 ntTSL 216.81■□□□□ 0.282e-7■■□□□ 13.1
RPS3P23396 ISOC2-208ENST00000591718 786 ntTSL 216.76■□□□□ 0.276e-6■■□□□ 13.1
RPS3P23396 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.7■□□□□ 0.262e-7■■□□□ 13.1
RPS3P23396 GGT1-212ENST00000419133 1078 ntTSL 516.64■□□□□ 0.251e-12■■□□□ 13.1
RPS3P23396 CAPRIN1-210ENST00000531668 479 ntTSL 316.63■□□□□ 0.251e-8■■□□□ 13.1
RPS3P23396 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.251e-12■■□□□ 13.1
RPS3P23396 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.226e-6■■□□□ 13.1
RPS3P23396 NAPA-205ENST00000594001 1417 ntTSL 216.42■□□□□ 0.226e-6■■□□□ 13.1
RPS3P23396 DCUN1D5-207ENST00000529281 1310 ntTSL 216.37■□□□□ 0.212e-7■■□□□ 13.1
RPS3P23396 FBXO2-205ENST00000475961 237 ntTSL 316.3■□□□□ 0.24e-32■■□□□ 13.1
RPS3P23396 SYS1-205ENST00000453003 433 ntTSL 1 (best)15.99■□□□□ 0.156e-6■■□□□ 13.1
RPS3P23396 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.81■□□□□ 0.122e-7■■□□□ 13.1
RPS3P23396 PRRC2A-204ENST00000462617 1015 ntTSL 515.65■□□□□ 0.16e-6■■□□□ 13.1
RPS3P23396 GGT1-222ENST00000455483 579 ntTSL 515.56■□□□□ 0.081e-12■■□□□ 13.1
RPS3P23396 SYS1-DBNDD2-201ENST00000419593 1313 ntAPPRIS ALT2 TSL 215.56■□□□□ 0.086e-6■■□□□ 13.1
RPS3P23396 MTCH2-204ENST00000533571 535 ntTSL 215.51■□□□□ 0.072e-7■■□□□ 13.1
RPS3P23396 GAMT-204ENST00000640164 520 ntTSL 215.36■□□□□ 0.056e-6■■□□□ 13.1
RPS3P23396 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.27■□□□□ 0.046e-6■■□□□ 13.1
Retrieved 100 of 24,271 protein–RNA pairs in 162.1 ms