RNA–Protein interactions for RNA: ENST00000473593.1

PDCD6IP-209, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 2

Gene PDCD6IP, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-209ENST00000473593 AEBP2Q6ZN18 517 aaPredicted RBP20.64■□□□□ 0.89
PDCD6IP-209ENST00000473593 CHIC1Q5VXU3 224 aa20.01■□□□□ 0.79
PDCD6IP-209ENST00000473593 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
PDCD6IP-209ENST00000473593 PHF23Q9BUL5 403 aaPredicted RBP17.53■□□□□ 0.4
PDCD6IP-209ENST00000473593 FOXD1Q16676 465 aa16.34■□□□□ 0.21
PDCD6IP-209ENST00000473593 PLPPR3Q6T4P5 718 aa16.22■□□□□ 0.19
PDCD6IP-209ENST00000473593 ADRA2BP18089 450 aa15.56■□□□□ 0.08
PDCD6IP-209ENST00000473593 PPP6R1Q9UPN7 881 aa15.53■□□□□ 0.08
PDCD6IP-209ENST00000473593 PIAS4Q8N2W9 510 aaPredicted RBP15.43■□□□□ 0.06
PDCD6IP-209ENST00000473593 MSH5O43196 834 aa15.22■□□□□ 0.03
PDCD6IP-209ENST00000473593 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
PDCD6IP-209ENST00000473593 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
PDCD6IP-209ENST00000473593 MAPK8IP2Q13387 824 aaPredicted RBP14.16□□□□□ -0.14
PDCD6IP-209ENST00000473593 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
PDCD6IP-209ENST00000473593 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.17
PDCD6IP-209ENST00000473593 CNKSR2Q8WXI2 1034 aa13.91□□□□□ -0.18
PDCD6IP-209ENST00000473593 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
PDCD6IP-209ENST00000473593 KCNA4P22459 653 aa13.66□□□□□ -0.22
PDCD6IP-209ENST00000473593 RNF216Q9NWF9 866 aaPredicted RBP13.66□□□□□ -0.22
PDCD6IP-209ENST00000473593 HOXD11P31277 338 aaPredicted RBP13.63□□□□□ -0.23
PDCD6IP-209ENST00000473593 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
PDCD6IP-209ENST00000473593 DCAF8L1A6NGE4 600 aa13.55□□□□□ -0.24
PDCD6IP-209ENST00000473593 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
PDCD6IP-209ENST00000473593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDCD6IP-209ENST00000473593 SLC4A1APQ9BWU0 796 aaKnown RBP13.03□□□□□ -0.32
PDCD6IP-209ENST00000473593 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
PDCD6IP-209ENST00000473593 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
PDCD6IP-209ENST00000473593 C1QBPQ07021 282 aaKnown RBP12.85□□□□□ -0.35
PDCD6IP-209ENST00000473593 SLC4A2P04920 1241 aa12.84□□□□□ -0.35
PDCD6IP-209ENST00000473593 U3KPZ7 1027 aaPredicted RBP12.77□□□□□ -0.37
PDCD6IP-209ENST00000473593 FOXD4L1Q9NU39 408 aa12.67□□□□□ -0.38
PDCD6IP-209ENST00000473593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
PDCD6IP-209ENST00000473593 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
PDCD6IP-209ENST00000473593 MYCNP04198 464 aaPredicted RBP12.61□□□□□ -0.39
PDCD6IP-209ENST00000473593 APLP2Q06481 763 aa12.6□□□□□ -0.39
PDCD6IP-209ENST00000473593 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
PDCD6IP-209ENST00000473593 CAPN15O75808 1086 aa12.52□□□□□ -0.41
PDCD6IP-209ENST00000473593 ZBTB22O15209 634 aa12.5□□□□□ -0.41
PDCD6IP-209ENST00000473593 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
PDCD6IP-209ENST00000473593 EHMT2Q96KQ7 1210 aa12.44□□□□□ -0.42
PDCD6IP-209ENST00000473593 TRHP20396 242 aaPredicted RBP12.41□□□□□ -0.42
PDCD6IP-209ENST00000473593 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
PDCD6IP-209ENST00000473593 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
PDCD6IP-209ENST00000473593 DSG3P32926 999 aa12.28□□□□□ -0.44
PDCD6IP-209ENST00000473593 ATXN8OSP0DMR3 200 aa12.24□□□□□ -0.45
PDCD6IP-209ENST00000473593 ABCB7O75027 752 aa12.23□□□□□ -0.45
PDCD6IP-209ENST00000473593 ATF5Q9Y2D1 282 aaPredicted RBP12.2□□□□□ -0.46
PDCD6IP-209ENST00000473593 POLA2Q14181 598 aa12.12□□□□□ -0.47
PDCD6IP-209ENST00000473593 ZBTB12Q9Y330 459 aaPredicted RBP11.96□□□□□ -0.49
PDCD6IP-209ENST00000473593 FBLN2P98095 1184 aa11.84□□□□□ -0.51
PDCD6IP-209ENST00000473593 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
PDCD6IP-209ENST00000473593 OSCARQ8IYS5 282 aa11.72□□□□□ -0.53
PDCD6IP-209ENST00000473593 MKRN4PQ13434 485 aaPredicted RBP11.66□□□□□ -0.54
PDCD6IP-209ENST00000473593 SPDYE2BA6NHP3 402 aa11.59□□□□□ -0.55
PDCD6IP-209ENST00000473593 SPDYE6P0CI01 402 aa11.59□□□□□ -0.55
PDCD6IP-209ENST00000473593 SPDYE2Q495Y8 402 aa11.59□□□□□ -0.55
PDCD6IP-209ENST00000473593 AKT1S1Q96B36 256 aa11.56□□□□□ -0.56
PDCD6IP-209ENST00000473593 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
PDCD6IP-209ENST00000473593 REM2Q8IYK8 340 aaPredicted RBP11.43□□□□□ -0.58
PDCD6IP-209ENST00000473593 SSUH2Q9Y2M2 353 aa11.41□□□□□ -0.58
PDCD6IP-209ENST00000473593 SPDYE4A6NLX3 237 aa11.39□□□□□ -0.59
PDCD6IP-209ENST00000473593 PABPN1Q86U42 306 aaKnown RBP eCLIP11.35□□□□□ -0.59
PDCD6IP-209ENST00000473593 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
PDCD6IP-209ENST00000473593 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
PDCD6IP-209ENST00000473593 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
PDCD6IP-209ENST00000473593 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
PDCD6IP-209ENST00000473593 FKBP8Q14318 412 aa11.22□□□□□ -0.61
PDCD6IP-209ENST00000473593 POTEHQ6S545 545 aa11.2□□□□□ -0.62
PDCD6IP-209ENST00000473593 PRR29P0C7W0 189 aa11.16□□□□□ -0.62
PDCD6IP-209ENST00000473593 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
PDCD6IP-209ENST00000473593 PIP4P2Q8N4L2 257 aa11.12□□□□□ -0.63
PDCD6IP-209ENST00000473593 FXR2P51116 673 aaKnown RBP eCLIP11.11□□□□□ -0.63
PDCD6IP-209ENST00000473593 PROM2Q8N271 834 aa11.07□□□□□ -0.64
PDCD6IP-209ENST00000473593 PRKAR2AP13861 404 aaKnown RBP11.05□□□□□ -0.64
PDCD6IP-209ENST00000473593 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
PDCD6IP-209ENST00000473593 FBXO3Q9UK99 471 aa10.92□□□□□ -0.66
PDCD6IP-209ENST00000473593 HAX1O00165 279 aa10.9□□□□□ -0.66
PDCD6IP-209ENST00000473593 PLEKHG5O94827 1062 aa10.9□□□□□ -0.66
PDCD6IP-209ENST00000473593 CREBZFQ9NS37 354 aa10.89□□□□□ -0.67
PDCD6IP-209ENST00000473593 MIER1Q8N108 512 aa10.87□□□□□ -0.67
PDCD6IP-209ENST00000473593 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
PDCD6IP-209ENST00000473593 PLCD3Q8N3E9 789 aa10.85□□□□□ -0.67
PDCD6IP-209ENST00000473593 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
PDCD6IP-209ENST00000473593 C19orf67A6NJJ6 358 aa10.74□□□□□ -0.69
PDCD6IP-209ENST00000473593 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
PDCD6IP-209ENST00000473593 CD44P16070 742 aaKnown RBP10.73□□□□□ -0.69
PDCD6IP-209ENST00000473593 VASPP50552 380 aaPredicted RBP10.71□□□□□ -0.69
PDCD6IP-209ENST00000473593 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
PDCD6IP-209ENST00000473593 MNX1P50219 401 aaPredicted RBP10.7□□□□□ -0.7
PDCD6IP-209ENST00000473593 SP7Q8TDD2 431 aaPredicted RBP10.69□□□□□ -0.7
PDCD6IP-209ENST00000473593 KLHL34Q8N239 644 aa10.67□□□□□ -0.7
PDCD6IP-209ENST00000473593 EVX2Q03828 476 aa10.66□□□□□ -0.7
PDCD6IP-209ENST00000473593 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
PDCD6IP-209ENST00000473593 TSPYL2Q9H2G4 693 aaPredicted RBP10.59□□□□□ -0.71
PDCD6IP-209ENST00000473593 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
PDCD6IP-209ENST00000473593 CLCN6P51797 869 aa10.53□□□□□ -0.72
PDCD6IP-209ENST00000473593 RASEFQ8IZ41 740 aa10.53□□□□□ -0.72
PDCD6IP-209ENST00000473593 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
PDCD6IP-209ENST00000473593 NUBP1P53384 320 aa10.51□□□□□ -0.73
PDCD6IP-209ENST00000473593 IFNLR1Q8IU57 520 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms