Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC023141.13-201ENST00000604991 943 ntBASIC14.12□□□□□ -0.15
CCL1P22362 AC007064.4-201ENST00000637740 555 ntBASIC14.12□□□□□ -0.15
CCL1P22362 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL1P22362 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL1P22362 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCL1P22362 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL1P22362 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CCL1P22362 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.11□□□□□ -0.15
CCL1P22362 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CCL1P22362 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 MRPL3P1-201ENST00000400109 1033 ntBASIC14.11□□□□□ -0.15
CCL1P22362 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL1P22362 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCL1P22362 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL1P22362 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.11□□□□□ -0.15
CCL1P22362 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.11□□□□□ -0.15
CCL1P22362 AP001005.1-201ENST00000571755 1248 ntBASIC14.11□□□□□ -0.15
CCL1P22362 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL1P22362 AC022532.1-201ENST00000624563 1728 ntBASIC14.11□□□□□ -0.15
CCL1P22362 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCL1P22362 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.11□□□□□ -0.15
CCL1P22362 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL1P22362 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CCL1P22362 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CCL1P22362 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL1P22362 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL1P22362 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCL1P22362 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL1P22362 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CCL1P22362 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 AC126177.1-201ENST00000547829 2218 ntBASIC14.1□□□□□ -0.15
CCL1P22362 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CCL1P22362 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CCL1P22362 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CCL1P22362 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL1P22362 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL1P22362 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL1P22362 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL1P22362 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 AL662844.1-201ENST00000546340 181 ntBASIC14.1□□□□□ -0.15
CCL1P22362 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL1P22362 SLC25A6P4-201ENST00000586535 553 ntBASIC14.1□□□□□ -0.15
CCL1P22362 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL1P22362 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CCL1P22362 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.1□□□□□ -0.15
CCL1P22362 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CCL1P22362 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
CCL1P22362 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.1□□□□□ -0.15
CCL1P22362 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CCL1P22362 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.1□□□□□ -0.15
CCL1P22362 AC011477.6-201ENST00000604980 1927 ntBASIC14.09□□□□□ -0.15
CCL1P22362 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL1P22362 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.09□□□□□ -0.15
CCL1P22362 AC073439.1-201ENST00000624121 1774 ntBASIC14.09□□□□□ -0.15
CCL1P22362 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CCL1P22362 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCL1P22362 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms