Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SDHBP21912 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SDHBP21912 AC022211.2-201ENST00000585075 2527 ntBASIC16.06■□□□□ 0.16
SDHBP21912 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SDHBP21912 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SDHBP21912 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 PDIA3P1-201ENST00000471856 1510 ntBASIC16.06■□□□□ 0.16
SDHBP21912 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 AC093525.8-201ENST00000624099 1342 ntBASIC16.06■□□□□ 0.16
SDHBP21912 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.06■□□□□ 0.16
SDHBP21912 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.06■□□□□ 0.16
SDHBP21912 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.06■□□□□ 0.16
SDHBP21912 AC098859.1-201ENST00000502915 1238 ntBASIC16.06■□□□□ 0.16
SDHBP21912 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC16.06■□□□□ 0.16
SDHBP21912 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.06■□□□□ 0.16
SDHBP21912 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.06■□□□□ 0.16
SDHBP21912 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.06■□□□□ 0.16
SDHBP21912 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SDHBP21912 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.06■□□□□ 0.16
SDHBP21912 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.06■□□□□ 0.16
SDHBP21912 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SDHBP21912 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHBP21912 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SDHBP21912 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHBP21912 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SDHBP21912 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.05■□□□□ 0.16
SDHBP21912 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.05■□□□□ 0.16
SDHBP21912 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.05■□□□□ 0.16
SDHBP21912 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 AC108860.2-201ENST00000562760 2183 ntBASIC16.05■□□□□ 0.16
SDHBP21912 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
SDHBP21912 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.05■□□□□ 0.16
SDHBP21912 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SDHBP21912 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.05■□□□□ 0.16
SDHBP21912 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.05■□□□□ 0.16
SDHBP21912 AC023310.3-201ENST00000557027 670 ntBASIC16.05■□□□□ 0.16
SDHBP21912 AC100756.1-201ENST00000562736 682 ntBASIC16.05■□□□□ 0.16
SDHBP21912 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHBP21912 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.05■□□□□ 0.16
SDHBP21912 AC138749.3-201ENST00000567691 622 ntBASIC16.05■□□□□ 0.16
SDHBP21912 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.05■□□□□ 0.16
SDHBP21912 AC116165.1-201ENST00000611806 668 ntBASIC16.05■□□□□ 0.16
SDHBP21912 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SDHBP21912 AC015967.2-201ENST00000624092 234 ntBASIC16.05■□□□□ 0.16
SDHBP21912 AC006435.4-201ENST00000625037 234 ntBASIC16.05■□□□□ 0.16
SDHBP21912 AL356737.1-201ENST00000634391 234 ntBASIC16.05■□□□□ 0.16
SDHBP21912 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.05■□□□□ 0.16
SDHBP21912 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.05■□□□□ 0.16
SDHBP21912 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
SDHBP21912 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.05■□□□□ 0.16
SDHBP21912 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.05■□□□□ 0.16
SDHBP21912 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SDHBP21912 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SDHBP21912 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHBP21912 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 TOP3BP1-201ENST00000420768 1380 ntBASIC16.04■□□□□ 0.16
SDHBP21912 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHBP21912 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
SDHBP21912 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SDHBP21912 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.04■□□□□ 0.16
SDHBP21912 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms