Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC005915.1-201ENST00000624912 2018 ntBASIC19.67■□□□□ 0.74
COL11A2P13942 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL11A2P13942 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.66■□□□□ 0.74
COL11A2P13942 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
COL11A2P13942 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
COL11A2P13942 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
COL11A2P13942 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.66■□□□□ 0.74
COL11A2P13942 CNN2P8-201ENST00000421872 913 ntBASIC19.66■□□□□ 0.74
COL11A2P13942 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.66■□□□□ 0.74
COL11A2P13942 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.66■□□□□ 0.74
COL11A2P13942 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.66■□□□□ 0.74
COL11A2P13942 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 AC243562.2-201ENST00000561247 970 ntBASIC19.66■□□□□ 0.74
COL11A2P13942 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.66■□□□□ 0.74
COL11A2P13942 AC000095.1-201ENST00000603208 874 ntBASIC19.66■□□□□ 0.74
COL11A2P13942 AL118558.3-201ENST00000607414 1079 ntBASIC19.66■□□□□ 0.74
COL11A2P13942 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
COL11A2P13942 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.66■□□□□ 0.74
COL11A2P13942 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COL11A2P13942 AL592424.1-201ENST00000563624 1536 ntBASIC19.66■□□□□ 0.74
COL11A2P13942 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL11A2P13942 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL11A2P13942 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
COL11A2P13942 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.65■□□□□ 0.74
COL11A2P13942 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC19.65■□□□□ 0.74
COL11A2P13942 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.65■□□□□ 0.74
COL11A2P13942 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.65■□□□□ 0.74
COL11A2P13942 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.65■□□□□ 0.74
COL11A2P13942 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.65■□□□□ 0.74
COL11A2P13942 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.65■□□□□ 0.74
COL11A2P13942 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.65■□□□□ 0.74
COL11A2P13942 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.65■□□□□ 0.74
COL11A2P13942 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.65■□□□□ 0.74
COL11A2P13942 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
COL11A2P13942 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COL11A2P13942 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.65■□□□□ 0.74
COL11A2P13942 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.65■□□□□ 0.74
COL11A2P13942 AL590640.2-201ENST00000457038 527 ntBASIC19.65■□□□□ 0.74
COL11A2P13942 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
COL11A2P13942 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC19.65■□□□□ 0.74
COL11A2P13942 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.65■□□□□ 0.74
COL11A2P13942 RPL13AP25-201ENST00000484130 612 ntBASIC19.65■□□□□ 0.74
COL11A2P13942 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.65■□□□□ 0.74
COL11A2P13942 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
COL11A2P13942 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
COL11A2P13942 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 ACTG1P17-201ENST00000558391 1119 ntBASIC19.65■□□□□ 0.74
COL11A2P13942 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.65■□□□□ 0.74
COL11A2P13942 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
COL11A2P13942 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COL11A2P13942 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
COL11A2P13942 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.64■□□□□ 0.74
COL11A2P13942 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
COL11A2P13942 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.64■□□□□ 0.73
COL11A2P13942 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.64■□□□□ 0.73
COL11A2P13942 AC078925.2-201ENST00000624013 1973 ntBASIC19.64■□□□□ 0.73
COL11A2P13942 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
COL11A2P13942 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A2P13942 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL11A2P13942 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.64■□□□□ 0.73
COL11A2P13942 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
COL11A2P13942 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
COL11A2P13942 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.64■□□□□ 0.73
COL11A2P13942 CALR4P-201ENST00000431943 946 ntBASIC19.64■□□□□ 0.73
COL11A2P13942 AC093433.1-201ENST00000458048 571 ntBASIC19.64■□□□□ 0.73
COL11A2P13942 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms